Paenibacillus graminis: PGRAT_18380
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Entry
PGRAT_18380 CDS
T03325
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgm03016
]
PGRAT_18380
Enzymes [BR:
pgm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PGRAT_18380
Transfer RNA biogenesis [BR:
pgm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PGRAT_18380
Prokaryotic type
PGRAT_18380
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIQ69379
UniProt:
A0A089NK25
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Position
complement(4157249..4158163)
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AA seq
304 aa
AA seq
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MSELTGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGISSDTEDLTGTITETVDDVHVTEAEVLAVLNSFQGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMTGMVWNGNHPDVTFRVLCSKGTYIRT
LCVDIGRALGLPGVMVKLERTMSAGISASHCLTLEQIAEYKDAGTLDRYLIAADEAISHL
PRHTVMDEKKKAALQGQRLSLRHVAPEVKRNGHFRLYDEQGGFLGIYELEETGAIAPVKV
FAQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttacaggtgttctggctgtctataagcctgccggattcacttcacatgat
gttgtcgccaaagcgcggcgcattctcggcatgaagcggatcggccacacggggaccctt
gatccccaggtgacaggcgtcttgcctctttgtcttggacgggcaacgcgtgttgtagaa
tatatccaggaactgcccaaagagtatgtagccacgctgcggctcgggatatccagtgat
accgaggatttaacaggtacgattacggaaaccgttgatgatgtgcatgttacggaagcc
gaagtacttgcagtgctgaattcttttcaaggtgtgatttctcaggttccacccatgtat
tctgcagtcaaggttgacgggaagcgcctctatgagctggcccgggaaggcaaaaccgta
gagcgtaagagccgcgaagtggaaatctatgagattgaaatgaccggtatggtctggaac
ggcaatcatccggatgttacgttccgtgtgctgtgctctaagggcacatacatccgtacc
ctatgcgtagatattggccgggcgcttggacttcccggtgttatggtgaagcttgaacgg
acgatgtctgccgggatatctgcaagccattgcctgaccctggaacaaatcgctgaatac
aaggatgcaggtaccctggataggtatttgattgcggcggacgaggcgatctcccatttg
cccaggcatacagtgatggacgagaagaaaaaggcagcgctgcaggggcagcgtctgtcc
ctccgtcatgtggcgcctgaagtaaagcgcaatgggcattttcggctttatgatgagcag
ggggggttcctggggatatatgaactggaagaaaccggagccatcgcgcctgtgaaggta
tttgcacaagcttga
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