KEGG   Paenibacillus graminis: PGRAT_20420
Entry
PGRAT_20420       CDS       T03325                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pgm  Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:pgm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgm03032]
    PGRAT_20420 (gyrB)
   03036 Chromosome and associated proteins [BR:pgm03036]
    PGRAT_20420 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pgm02048]
    PGRAT_20420 (gyrB)
Enzymes [BR:pgm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PGRAT_20420 (gyrB)
DNA replication proteins [BR:pgm03032]
 Prokaryotic type
  DNA Topoisomerases
   PGRAT_20420 (gyrB)
Chromosome and associated proteins [BR:pgm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PGRAT_20420 (gyrB)
Prokaryotic defense system [BR:pgm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PGRAT_20420 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AIQ69726
UniProt: A0A089M7E2
LinkDB
Position
complement(4539983..4541965)
AA seq 660 aa
MLEQIDMFAKVSKNGGTAATGYDADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIV
DNAVDEHLAKFCSKIDITLRKDGSVTVLDNGRGIPTGMHKTGVPTPQVVFTILHAGGKFG
GSGYKKSGGLHGVGASVTNALSEWLEVEIYRDGKIHRQRFEYWVDKSGKEHVGEPVTGLE
VLGNTNKTGSKITFKPDIRVFPNGIALNYDTLAERVQEIAFLNSGLRIMLTDERSGRQDE
YYYEGGASQFVQFLNEGKDVLHDVIHFSSEKDDIEVEVALQYNAGYTETLASFVNSIPTR
SGGTHETGFKTAYTRVLNDYARRTQLLKEKDKNLEGNDLREGMMAVISVKMSEVEFVGQT
KDQLGSASARSAVDYIVSENMARFLEENPQVAQSLLKKSIQASKAREAARKARDEIRSGK
KRSESSNLGGKLSPAQSKDVTRTELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNSEK
AKLLDVLKNDEFKAIISTIGAGIGPDFAVEDSNYSKIIIMTDADTDGAHIQVLLLTFFYR
YMKPLIDAGKVYIAQPPLYKLTRKSGKLETVRYAWSDEELANYLKEFGKNFELQRYKGLG
EMNPDQLWETTMNPESRNLLQVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFTEIEE
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgctcgaacagatcgatatgtttgcaaaagtctccaagaacggcggcactgccgcgact
ggatacgatgctgacgacattcaggtgctcgaaggtctggttgcagtacgcaaacggccc
ggcatgtatatcggcagtacgagttcttcgggactgcaccatctggtatgggaaatcgtg
gataacgccgtagatgagcatttggctaaattttgctcgaagattgatattaccctccgc
aaggatggctcagtgaccgtgctcgataacggacgcggaattccaaccggaatgcacaag
accggagtgcctacaccgcaggtggtatttacgatcctccacgcaggcggtaaattcgga
ggctccggctacaagaaatccggcggtctgcacggcgtaggggcttcagtcacgaatgct
ttgtccgagtggctggaagttgaaatataccgggacggcaaaatccaccggcagcgcttt
gaatattgggtagataaaagcgggaaggagcatgtcggtgagcccgtaacggggcttgaa
gttctggggaatacgaataagaccggatcgaagattacgttcaagccggatattcgcgtc
tttccaaacggcattgccctgaattatgatacgcttgcggaacgggtgcaggagattgca
tttctgaattccggactgcgcattatgctgacggatgaacgcagcggccgccaggatgaa
tactattatgaaggcggggccagccagttcgtgcagttcctcaatgagggcaaggatgtg
ctgcatgatgtgatccatttcagctcggagaaggatgatattgaagttgaggtagcgctg
cagtacaatgccggttatacagaaacgctggcttccttcgtgaactcgattcctacccgc
agcggcggcacgcatgaaacaggcttcaagacagcctacacccgggtgttgaatgattat
gcccgccggacgcagctgctcaaggaaaaggacaagaacctggagggcaatgatctccgc
gaaggcatgatggcggtaatcagcgtcaagatgtccgaggtggaattcgtcgggcagacc
aaggaccagcttggcagcgcctctgcgcgcagtgccgtggattatatcgtatctgagaat
atggcccgtttcctggaagaaaatccgcaggtggctcagagtctgctgaagaagtccatt
caggcttctaaggctcgggaagcggcacgcaaagcccgcgatgagatccgcagcggcaaa
aaacgcagtgaaagctcaaatcttggcggcaagctgtctcctgcacagtccaaggatgtg
acacgcacagagctgttcattgtcgaaggcgattctgccggaggctccgccaagcagggc
cgggattccaagattcaggccatcctgccgctgaagggcaagccgatgaattccgagaag
gccaagctgctggatgtgcttaagaacgacgaattcaaggcgataatttccaccattggt
gcagggatcggaccggattttgccgtagaagacagcaattattccaagatcatcatcatg
accgatgccgatacggacggggcgcatatccaggtgctgctgctgacctttttctatcgt
tatatgaagccgctgatcgatgccggcaaggtctacatcgcccagcctccgctttataag
ctgacgcgcaaatcgggcaagctggagacggtacgctacgcctggagcgatgaggaactg
gcgaactacctgaaggagtttggcaagaatttcgagctgcagcgctacaagggacttggt
gaaatgaacccggatcagctgtgggagactacgatgaatccggaatcgcgcaacctgctg
caggtgcagattgaggacgccgccaaagccgagcgccgtgtatccacgctgatgggcgat
aaggttgacccccgcaagcgctggattgtggagaatgtcgatttcacggagattgaggag
tag

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