Paenibacillus graminis: PGRAT_20965
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Entry
PGRAT_20965 CDS
T03325
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pgm
Paenibacillus graminis
Pathway
pgm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PGRAT_20965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pgm03011
]
PGRAT_20965
Ribosome [BR:
pgm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PGRAT_20965
Bacteria
PGRAT_20965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
RNase_II_C_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIQ69830
UniProt:
A0A089MBU8
LinkDB
All DBs
Position
complement(4655523..4656722)
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AA seq
399 aa
AA seq
DB search
MTSQEGLEIISLKKGDTVKGTIVKIEDNQAYVSIGYKYDGVIPIRELSSVQLDNAAAAVE
VGQEVECKVVSINDNKESLVLSKRAIDSEKSWEDLEKYFASQEAFEVTVADVVKGGLVAD
VGARGFIPASMVERHFVEDFSDYKGRTLRVKVKELDRENSKVILSAKEVLEEEFEANKQK
IMSELSEGQIIEGTVQRLTQFGAFVDVGGVDGLVHVSEIAWNHVEKPSDVVSEGEKVKVK
VLKVDPEKGKISLSIKAAAPGPWDSAAGKINIGDVVTGEVKRLVNFGAFVELLPGVEGLV
HISQISHKHIGTPHEVLKEGQEVQVKVLDFNPSEKRVSLSIKETEEAPAQAARPERSNNR
DRAPKEVLNNPNVSLSNEGLSFTLAERFGDKLDKFKGNN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgactagccaagaaggtttggaaatcatttctctgaaaaaaggcgataccgtgaaagga
acaatcgtcaaaatcgaagataaccaagcttatgtaagcattggatataaatacgacggc
gtgattccgattcgcgaattgtcttccgtacaactggacaacgctgctgcagcggttgaa
gttggacaagaagtggaatgcaaggttgtcagcatcaatgacaacaaagaaagcctcgtg
ctttccaaacgtgcaatcgacagcgaaaaatcatgggaagatctcgaaaaatattttgcg
tcccaggaagcgttcgaagtcactgtggctgatgttgtcaaaggcggcctcgtggctgat
gttggcgcgcgcggatttattccggcttccatggttgaacgtcacttcgtagaagatttc
agcgactataaaggccgcacacttcgcgtaaaagtgaaagaattggaccgcgagaacagc
aaggttattctttctgccaaagaagtcctggaagaagaattcgaagccaacaagcagaag
attatgtccgagctgtccgaaggacaaatcattgaaggtacagtgcaacgcttgactcaa
ttcggcgcatttgttgatgtaggcggcgttgatggtctggttcacgtatccgaaatcgct
tggaatcatgtagagaaaccttctgatgtggtttctgaaggcgaaaaggttaaggttaaa
gtacttaaggttgaccctgaaaaaggcaaaatcagcctcagtatcaaagctgccgctcca
ggtccttgggattctgctgcaggcaaaatcaacattggcgatgtagtaacaggcgaagtt
aaacgcctcgtgaacttcggagcatttgttgaactgcttccaggcgtggaaggccttgtg
cacatctcccagatctcccacaagcacatcggaactccgcatgaagtgctgaaagaagga
caagaggtacaggttaaggttctggacttcaatccatccgagaagcgcgtaagcttgagc
atcaaggaaaccgaagaagctcctgctcaagcggctagaccagaacgcagcaacaacaga
gacagagcgccaaaagaagtgctgaacaaccctaacgtgtcgctcagcaatgaaggactc
agctttacgctggctgaacgttttggcgacaagctggacaaattcaagggcaataactaa
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