Paenibacillus graminis: PGRAT_22310
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Entry
PGRAT_22310 CDS
T03325
Name
(GenBank) LacI family transcriptional regulator
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgm03000
]
PGRAT_22310
Transcription factors [BR:
pgm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PGRAT_22310
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
HTH_26
HTH_Tnp_ISL3
MarR_2
HTH_38
HTH_31
HTH_Crp_2
HTH_23
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AIQ70077
UniProt:
A0A089M9Z5
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All DBs
Position
4940243..4941247
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AA seq
334 aa
AA seq
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MMITIKDIARVAGVSHTTVSRALNGSPLIKKVTRDKIEKIAEEMNYVPNYSAKSLVSKRS
FTIGLFFSSIEQGTSASFLVDAIKGISHILDENFNLTVNGIDGVHHFGTIQPQRFDGILV
MSQSDEDNAFIYHVKKMGIPLVVLNRQLEDPGIMNVVANDREGVKEAIDYAVRQGHRKFA
IIEGKPGFKSSSERKQGFMDSLIAHRLPLNSEYFAAGDYSIESGYAAMAALLLLQDPPTA
VFCSNDDMAIGAMNACYAHKADVPGQISLIGFDDIMFSRYTNPALTTVRKPITEISELGT
KMLVQLLQQPETQPQQLFVKTSLVIRQTVAELQQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
attatgatcaccatcaaagacattgcacgtgtcgcgggcgtctcccatacaactgtttcc
cgggcgctgaacggcagcccgctgatcaagaaggttacccgggacaaaatagaaaaaatc
gccgaagaaatgaactacgtccccaattacagcgccaagagcctggtgtccaaaaggtcc
ttcaccattggcctgtttttttccagcattgagcaaggaacctcggccagtttcctggtg
gatgccatcaagggaatcagccacatcctggatgagaactttaacttgacggtcaacggc
atagacggcgtgcatcattttggcactattcagccgcagcgctttgacggtatcctggtc
atgagccagagcgatgaggataatgcctttatctatcatgtgaagaagatgggcatccca
ctggtcgtgctgaaccgccagcttgaagatcccggcattatgaatgtggtggctaatgac
cgtgaaggcgtgaaggaagccatcgactatgccgtccggcagggacaccggaaatttgcc
attatcgaaggcaaacccggcttcaagtcgtcgagcgagcgcaagcagggcttcatggac
agcctgattgcccatcgtcttccgctgaactccgaatattttgcggccggagactacagt
attgagagcggttatgcagctatggctgctctgctcctgctgcaagatccgccgacagct
gtattttgctccaatgacgatatggcgattggtgcgatgaatgcctgctacgcccataaa
gccgatgttccagggcagatttccctgattggattcgatgatatcatgttctcccggtac
acgaatcccgccctgactacggtccgcaagccgattacagaaatcagcgagcttggcact
aaaatgctggtccagctgcttcagcagccggagacccaaccccagcagctgttcgtgaag
acatcgttagtcatccgccagacagtagctgaattacagcagtaa
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