Paenibacillus graminis: PGRAT_24565
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Entry
PGRAT_24565 CDS
T03325
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00470
D-Amino acid metabolism
pgm00550
Peptidoglycan biosynthesis
pgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGRAT_24565 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGRAT_24565 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgm01011
]
PGRAT_24565 (murD)
Enzymes [BR:
pgm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PGRAT_24565 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgm01011
]
Precursor biosynthesis
Amino acid ligase
PGRAT_24565 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox_3
2-Hacid_dh_C
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AIQ70445
UniProt:
A0A089MDL8
LinkDB
All DBs
Position
complement(5409880..5411298)
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AA seq
472 aa
AA seq
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MEHPDQYRGKEVVVLGLAKSGVQVAKVLHERGAAVTVNDKKERDQSPEASELESLGISVI
CGGHPEGLIHPGVSLVVKNPGIPYSVPPVQKALELGIEVVTEVEVAYHLCAAPMIGITGS
NGKTTTTTWVGRMLDAAGMSPIVAGNIGTPLCQAAQEAHADNWMVVELSSFQLKGTKAFR
PKVGCLLNVAETHLDYHGGMEDYIASKAKLFANQEPSDTAVLNWDDPVCRELVPYIKAAI
LPFSMTEELVQGVFVRPAFVPDTDDGLKRMIVYRDYSESETEIAAVDSIGLPGRFNVENA
LAACGIAIAAGADPAGLAEVLANFRGVEHRLEYVADKAGAAYYNNSKATNSKATSMALAS
FRKPVVLIAGGLDRGSDYMELLPVLGGIKALVALGQTKDKLAAVAGMAGVKRIISVDNGE
SAAAVLQEAVREASALAEAGDIVLLSPACASWDMFTSYEERGRIFKEAVHNL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagcatccagatcaataccgcggtaaagaagtggtcgtcctgggcctggccaaaagc
ggcgtccaggtggccaaggtgctgcatgagcgcggcgcggccgtaacggttaacgacaaa
aaagaaagagatcaaagtcccgaagcttccgaactggagtctttgggaatttctgttata
tgcggcggtcatccggagggattgattcatccgggcgtgagccttgtggttaagaacccg
gggattccctattccgtgcctcctgttcaaaaagcgctggaactgggcatcgaggtagtg
accgaggtggaggtagcctaccacctgtgcgcagcgccaatgattggcattaccggttcg
aacggcaagacgacgacaaccacctgggtgggccgtatgctggacgctgcgggaatgagc
cctatcgtggccgggaacatcggcacacccctctgccaggccgcacaggaggctcacgca
gacaactggatggttgtcgagcttagcagctttcagctcaaaggcacgaaagctttccgt
cctaaggtgggctgtctgctgaatgtggcagagacccatctggattatcatgggggaatg
gaggattacatcgcctccaaggccaagctgtttgccaatcaggagccaagcgatactgcg
gtgctgaactgggatgatcctgtctgccgggagctggttccttatatcaaggcggcaatt
ctcccgttctccatgactgaggaactggttcagggggtctttgtccgtcctgcctttgtt
ccggataccgatgatgggcttaagcggatgattgtctaccgggattattccgagagtgag
acggaaattgccgctgttgattcgatcggcctgccgggccgtttcaatgtggagaatgcg
ctggctgcttgcgggatagccatcgctgcaggtgcagaccctgccgggctggcggaagtg
ctggcaaatttcagaggcgtggagcacaggttggagtatgtggcggataaagcgggagct
gcgtattacaacaactccaaagcgactaactccaaagcgacctccatggcgctggcttcc
ttccggaagccggtggttctgattgccggcgggctggaccgcggttccgactatatggag
ctgctgcctgtcctcggcggtatcaaagcccttgtggcgctggggcagaccaaggacaag
ctggcagccgtagcgggcatggcaggagtaaagcgcattatctccgtcgataatggggag
agcgccgccgccgtgctgcaagaagccgtgcgggaggcttccgctctggcggaagcggga
gatatcgtgctcctgtctcctgcatgcgccagttgggatatgtttacatcctatgaggag
cgcgggcgtatttttaaagaggcggtgcataacctttaa
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