Paenibacillus graminis: PGRAT_24915
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Entry
PGRAT_24915 CDS
T03325
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_24915
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGRAT_24915
Archaeal homologous recombinant proteins
PGRAT_24915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIQ70513
UniProt:
A0A089MG95
LinkDB
All DBs
Position
complement(5482726..5486361)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKPILLKVAGLQSYREQQEIDFGSLTETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHSEDQLSVAFTFELTSSSGPRRYRVERKFKRTGDQSVSNTISRFIEIAADGD
HVMADKLADVTRCVEEHIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQY
GDGLALKLSRRVKENEAALRALEAEQQGLGSAGKADVEAAAERLQEAVRQAADCRKRLDE
AVQRAERYARIRELQDERARREEQLQALLAQEADILLLEQKLSKSDEAGKMLPALKAWRS
AEEAWKSRLARAEGQEVQAAAAERKAAELAAAEAAAQAALAAEEPALRQGADTYRRALEL
EAELGGLRHERAAVLERRDEASRGLAARRESMARERELLAKGQKRQHELQQSLQPLAVRS
QERQSLQEAMQRLQGLRSASSQRETAERERAERAAVLAAAEARLAAAGERQRSLEAQRGG
GIAAAALHLEQLRAGEAAAEAAAGQLELHGSTLAAALKGQELHRLSLSLASELQDGQPCP
VCGSLHHPTPALAEDSGGREELERRLEQSRTLGRRATETRHWFRSLLEQDLAWLEQVYGE
GAAESFAAPAAAGMEHRGGATLSAGPSSLAAGLDSLDLSRPSGSSSLAAGLDSFDLSRPL
GSSSPEAALSSIDSSPGSASSGPGAASVSPGGPVPSSSATVPEEQALSRLEAEFSALKAR
SGELRRVAAEWQRSLQEQQQLGHKEAAAVEAEAVWLQGLTAKAGELDRQMGQLREEWSQL
FPELAPDEAEHAYREMLKKDEQAEEIRGRLEISVKFLDDKSTSVQALQEEIAALDKDLAQ
WNAQLEGKEALEREKEQRLLQWTGGRAAAALLAECEQRLQELQTGLESSRQVHRSAAEQA
QHAVKEAAISRQAAESAREHSEAAVSVWEDCLQASAFASASEVEGAALAPEERAEAAARV
RAHRDGEAEALLQLRNIEEKLEGAVLSAEDWQESQETLRKCKEDDETALQGRARAERDLE
DLQHRHIRWMELEGKRSEHAALQDRLSKLQTVLRGNAFVEYIAEEQLMQVCQAASQRLRF
LSKQRYALEVDSGGGFVIRDDGNGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGQYP
LQFFFLDEGFGTLDPDLLDTVITSLERLHNDQLSVGIISHVPELRARLPRKLVVIPAEQG
GGGSRIILEKM
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaattctactaaaagtagccggactccaaagctatagagagcagcaggagatt
gattttggaagtctgacggagacggggctgttcggtattttcggaccgacgggaagcggc
aaatccagcttgctggacgcgataacgctggcaatgtacgggaaggtggaacgtgcggtc
aatgggacccagggcatcatgaaccactccgaggaccagctaagcgttgcttttactttt
gagctcacttcctcttccggtccccgccgttacagggtggaacggaaattcaaacggacc
ggggaccagtcggtgagcaatacgatcagccgtttcattgaaattgccgcagatggggac
cacgtgatggccgacaagcttgcggatgttacccgctgcgtggaagagcatatcgggctc
aaaatggatgatttcacccgtgccgttgtgctgccgcaggggaaatttgccgaatttctg
tcgctgcgcggcgtggaccgcaggcaaatgctgcagcgactttttcatctggagcagtat
ggcgacgggctggcgctgaagctcagccgccgggtcaaggagaacgaggcggccctgcgg
gccctggaggctgagcagcaggggctgggcagtgcaggcaaggcggatgttgaggccgcc
gccgaacggctgcaggaagcggtccggcaggcggcagactgccgcaagcggctggatgag
gcggtgcagcgggcggaacgttatgcccgcatccgcgagctgcaggacgagcgcgcccgg
cgcgaggagcagcttcaggctttgcttgcgcaggaggcggacatcctcctgctggaacag
aagctcagcaagtctgatgaagcggggaagatgctgcctgcgctgaaggcctggcgcagt
gcggaagaagcttggaagagccgcttggcccgcgcggagggccaggaggtgcaggctgcc
gccgccgagcggaaggcggcggagctggccgcagctgaagcggctgcgcaggctgcgctg
gctgcggaggagcccgccctccggcagggggcggatacgtaccgccgcgcgctcgagctg
gaagccgagctcggcgggttgcggcacgagcgcgcagcggtgctggagcgccgcgacgag
gcctcccgcgggctggctgcccggcgggagagcatggcccgggagcgtgagcttttggcc
aagggccaaaagcgccagcacgagctgcagcagagcctgcagccgttagcggtccgctcc
caggagcggcagtcgctgcaggaagccatgcagcggctgcaaggcctgcgttccgcctcc
tcccagcgggagacggcggaacgtgaacgcgccgagcgcgccgcggtgctcgcagcggcg
gaggcgcggctggccgctgccggggaacggcagcggtcgctggaggcgcagcgcggcggg
ggaatcgccgccgccgcgctgcacctggaacagctgcgggccggggaggccgcagcagag
gcagccgccggtcagctggagcttcatggaagcacgcttgcggcggcgctcaagggccaa
gagctgcaccggctctctctttcgctcgccagtgaactgcaggatgggcagccgtgcccg
gtctgcggcagcctccaccaccccacgcccgcgctggcagaggacagcggcgggcgggaa
gagctggaacgccggctcgaacagtcccggaccctgggcagacgggcgactgaaacgcgg
cattggttccgcagcctgctggagcaagacttagcctggctggagcaggtatacggcgaa
ggtgcggcagaatccttcgcagcacctgcggctgcaggaatggagcaccgcggcggtgct
acgctttctgccggaccttccagccttgcagcaggcttggactctcttgatctatcacgg
ccttcgggctcttccagccttgcagcaggcttggactcttttgatctatcgcggcctttg
ggctcttccagccctgaagcagccctgagctccattgattcatcaccgggttcggcttct
tcaggtcctggtgcagcttccgtctccccgggaggccctgttccatcaagctccgccaca
gttcctgaggagcaggccttgtcccgcttggaagctgaattctctgcgcttaaggcccgt
tccggtgaattgcgccgggttgcagcagagtggcagcgttccttgcaggagcagcagcag
ctggggcacaaggaagctgcggcggtggaagccgaagctgtgtggctgcaaggcctgaca
gccaaggccggagagctggaccggcagatgggacagctacgggaggaatggtcacagtta
tttccggagctggcaccggacgaagccgaacatgcctaccgtgaaatgctgaagaaggat
gagcaggctgaggagatcagaggacggctggagatcagtgtcaagtttctggatgacaag
agcacttccgtgcaggcgctgcaggaggagattgcagctttggacaaagacttggcccag
tggaacgcacagcttgaaggcaaagaagcgctggagcgggagaaagagcagcgcctgctc
cagtggaccggcggccgtgcagccgctgccttgctggcagagtgtgagcagcgcctgcag
gagctgcagacaggactggagagcagcagacaggttcaccggtcggcagcagaacaagca
cagcatgcggtgaaggaagccgctatcagccgtcaggcggcggagtccgcccgtgagcat
tctgaggctgcagtctcggtttgggaggattgcctccaggcctcagcatttgcttccgcc
tcggaggtggaaggcgctgcacttgcgccggaggaacgggcagaggctgctgcccgtgtg
cgggcccaccgtgacggtgaagctgaagcattgctccaactgcggaatattgaagagaag
ctggaaggggctgtgttgagcgcagaagactggcaggaaagtcaggagacactgcgtaag
tgcaaggaagacgatgagactgcactgcagggccgggcccgcgctgaacgtgatctggaa
gatctgcagcaccgtcatatccgctggatggagctggaaggcaaacgttcggagcatgca
gcccttcaggaccggctgtccaagctgcaaacggtgctgcgcggaaatgcttttgtggaa
tatattgccgaggagcagctgatgcaggtatgccaggccgcctcacagcggctgcgtttc
ctgagcaagcagcgttatgcgcttgaggtcgattccggcggagggtttgtgatccgggat
gacgggaatggcggtgtgcggcgtcctgtatccaccctgtccggcggggagaccttcctg
acctctttgtccctggcgctggcgctttcggcgcagatccagcttcgcgggcagtatccg
ctgcaattcttttttctggatgaaggcttcggcacactggaccccgatctgcttgataca
gtcatcacttcgctcgaaagattgcataacgatcagctctcagtgggtatcatcagccac
gttcccgaactcagagcacgtctgccccgcaagctggttgtcatcccggcagagcaggga
ggcgggggctcacggattattctggagaaaatgtga
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