Paenibacillus graminis: PGRAT_24920
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Entry
PGRAT_24920 CDS
T03325
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_24920
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGRAT_24920
Archaeal homologous recombinant proteins
PGRAT_24920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
CobU
Motif
Other DBs
NCBI-ProteinID:
AIQ70514
UniProt:
A0A089NN62
LinkDB
All DBs
Position
complement(5486363..5487544)
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AA seq
393 aa
AA seq
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MRILHTGDWHLGRMLEGRSRQKEQEQFIDELVEIADASQADLILMAGDVYDSVNPPAAAE
QLFYDAAARLTANGRPLVVISGNHDQPERVASVSPLVRRQGITLVGMPTSEPVTVHAVRT
GEVAKIAALPYPSEARLGELLAGDAGEDELRLAYSARVGRLMNLLGREFTPQTVNLAMSH
IYVLGGVESDSERPIQVGGAYTVDPSALSCGAQYTALGHLHRAQRVKGGNMIRYSGSPLA
YSFSEAGQAKSVAMIEVAPGGEPSFEEIYLRCGRPLVNWKSSGGLQEVYGWLDEGRDATA
FIDLELRLTEAMSLNDIQRLRKSREGIIHIRPVYPQMEQELEEMARSRMPVQELFRRFYQ
RQTGGAEPEDSLIELFLELAEEERREPVEGEEN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatattgcatacgggggactggcatctggggcggatgctggaaggaagaagccgg
cagaaggagcaggagcagttcatcgatgagctggtggagattgccgatgcttcccaggca
gatcttatactgatggcgggagatgtctacgattccgtgaatccgccggcagcggcggag
cagttattctacgatgcagccgcccggctaacggcaaatggcaggccgcttgtggtcatc
tccggcaatcacgatcagcctgagcgtgtcgcgtccgtatccccgcttgtccgcagacaa
ggcattactctggtaggcatgcctacctccgaaccggtgacggttcatgccgtacgtaca
ggcgaggttgccaaaatcgctgcgctcccttatccctcagaagcacggcttggcgagctc
cttgccggggatgcgggggaagatgaactccgccttgcctatagtgcacgggttggcagg
ctgatgaatctgctgggccgggaattcacgccgcagaccgtcaatctggcgatgagccat
atttatgtgctgggcggagtggagagtgactccgagcggcctattcaggtcgggggagcg
tacactgtagatccttcagctttgtcatgcggtgcacagtatacagcgcttgggcatctt
caccgcgcccagcgcgtaaaaggcggcaacatgatccgttacagcggatcgccgctggcc
tacagcttctccgaagccgggcaggcgaagtccgtggcaatgattgaggttgcgcctgga
ggcgagccctctttcgaggaaatatatctccgctgcggccgtccattggtgaactggaag
tcctccggcggtttgcaggaggtctacggctggctggatgaaggccgggacgccacagct
tttattgatctggagctccgcctcacggaagcgatgtcgctgaatgatatccagcggctg
cgcaaatcccgcgaggggattatacatatccgcccggtttatccgcagatggagcaggag
cttgaggagatggcccgctcgcgcatgccggtgcaggagctgttccgcagattctatcag
cggcagaccggcggggcagagcctgaggacagcctgatcgagctgttcctggagctggcg
gaagaagagcggcgtgagcctgtggaaggggaggagaactga
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