Paenibacillus graminis: PGRAT_25235
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Entry
PGRAT_25235 CDS
T03325
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00240
Pyrimidine metabolism
pgm01100
Metabolic pathways
pgm01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PGRAT_25235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgm02044
]
PGRAT_25235
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PGRAT_25235
Secretion system [BR:
pgm02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PGRAT_25235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
DUF5796
APOBEC_N
SNAD4
OTT_1508_deam
NAD1
Motif
Other DBs
NCBI-ProteinID:
AIQ70569
UniProt:
A0A089NNA0
LinkDB
All DBs
Position
complement(5565553..5566071)
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AA seq
172 aa
AA seq
DB search
MTVAYRKNWDTYFMDIACMVSTRSRCPRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAG
CMVSEQYEREVVNGVETMVKKQRCIRTIHAEQNLLLFTDRSDREGSTVYVTDEPCWTCAN
MLANSGIVEIVYLRPYRKDMEKVEAMLASKGIVFRQLENYEPPKETMITVSE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagcttaccggaagaattgggatacttatttcatggatattgcctgcatggtc
tccacacgctcgcgctgcccccgccgccatgttggtgcggtcctcgtacagggcaaaaag
ctgctgggcacggcgtataatggcgcacctatgggcgtgccggattgttccgaggcggga
tgtatggtttcggagcagtatgaacgcgaagtcgttaacggtgtggagacgatggtgaag
aagcagcgctgcatccgcaccattcacgccgagcagaatctgctgctgttcacggaccgg
agcgaccgcgagggcagcaccgtctatgtcaccgatgaaccctgctggacctgcgccaat
atgctggccaacagcgggattgtcgagatcgtctatctgcgtccttaccgcaaggacatg
gagaaagtggaggccatgctggcctccaaaggcattgttttccgtcagttggagaactat
gaaccaccgaaggaaacgatgattaccgtatcggaatag
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