Paenibacillus graminis: PGRAT_25525
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Entry
PGRAT_25525 CDS
T03325
Name
(GenBank) hypothetical protein
KO
K20375
HTH-type transcriptional regulator, pheromone-responsive regulator
Organism
pgm
Paenibacillus graminis
Pathway
pgm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGRAT_25525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgm03000
]
PGRAT_25525
Transcription factors [BR:
pgm03000
]
Prokaryotic type
Helix-turn-helix
Other families
PGRAT_25525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
HTH_19
HTH_31
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AIQ70623
UniProt:
A0A089MGI3
LinkDB
All DBs
Position
complement(5638563..5639459)
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AA seq
298 aa
AA seq
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MGRFLGETTKRIRKSRGMNQSDLAEGIMSRSNLSRFEGGKYFPGYDKLILILDKLEMSLE
ELLFLHHDYAQPVKRTLHLTLVEAGNRYEFEKVRDVSYECHLLYKTTRTEAFYHLYLLGQ
GLLIQYGHEDQISQLSEIANYIKPYLLGVDTWYLYEFKLLNNFLFTLNSDDAIFFGLRAV
QEFNKYHSFAESRTIQQHLLQNISNICLGERNYEKSLFFLTKALPLADKTNLLYDKIVTL
VLYEITVICLKQSQDTSKLGSYLAILQQLDFMDSYHALLDVCRKHLPMDLPPVSLGML
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggttcctgggggagaccacgaagcggattcgtaaatccagagggatgaatcag
tccgacctcgcagagggcatcatgagccgctcgaatctgtcacgttttgagggggggaag
tatttccccgggtacgacaagctgattctgattctggacaagctggaaatgtcgctggag
gagctgttgtttttgcatcatgactatgcccagccggtcaaacggacactccacctgacc
ttagttgaagcggggaaccgttacgaattcgagaaggtccgggacgtcagctatgaatgc
catctgttgtataagactacgcggacggaagctttctaccatctgtacttgctcggacag
ggactgctgattcagtatggccatgaggaccaaatcagtcaactgagcgagattgccaat
tacattaagccctatctgcttggggtggatacctggtatttgtatgaattcaagctgctt
aacaactttttgttcacactgaacagtgacgatgcgattttttttggcctgagagctgtg
caagaatttaataaatatcattcctttgccgagagcagaaccatccagcagcatttgctc
cagaatatctccaatatttgtctgggggagcggaattatgagaaaagcctgttttttctg
acaaaggctttgcctttggcggataaaaccaatctgctctacgacaagatcgtgaccttg
gtgttatatgaaatcactgtaatctgcctgaagcaaagtcaggacacgtcaaaattaggc
agctatttggccattctgcagcagcttgatttcatggacagctatcatgcccttctggat
gtatgccgtaagcatcttcccatggacctgccgccggtaagcttaggtatgttatag
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