Paenibacillus graminis: PGRAT_26875
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Entry
PGRAT_26875 CDS
T03325
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00020
Citrate cycle (TCA cycle)
pgm00190
Oxidative phosphorylation
pgm00650
Butanoate metabolism
pgm00720
Other carbon fixation pathways
pgm01100
Metabolic pathways
pgm01110
Biosynthesis of secondary metabolites
pgm01120
Microbial metabolism in diverse environments
pgm01200
Carbon metabolism
Module
pgm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PGRAT_26875 (sdhB)
00650 Butanoate metabolism
PGRAT_26875 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PGRAT_26875 (sdhB)
00720 Other carbon fixation pathways
PGRAT_26875 (sdhB)
Enzymes [BR:
pgm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PGRAT_26875 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_13
Fer4_4
Fer4_15
Fer4_21
Fer4_3
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
AIQ70841
UniProt:
A0A089MAJ6
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Position
complement(5923276..5924040)
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AA seq
254 aa
AA seq
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MAETAAAPKNVKFVITRQDEPETAPYTEEFELAYRPGMNVISALMEIQRNPVNAKGDSTV
PVCWESNCLEEVCGACSMVINGKPRQACAALIDNLEQPVRIEPMKTFPVVRDLVIDRSRM
FGALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNEKTNFIG
PAAISQVRLFNAHPTGEMNADERLDALMEDGGIDGCGNSQNCVRACPKGIPLTTSIAEIN
KQTTKHMFKRWLGV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgctgcagctcccaaaaacgtaaaatttgtgattacccgccaggacgaa
ccggagacggccccttatacggaagagttcgagcttgcgtaccgtccggggatgaatgtg
atcagcgcgttgatggagattcagcgcaacccggtcaacgccaagggggacagcacggtt
ccggtctgctgggagtccaactgtctggaggaggtgtgcggggcctgctccatggtaatc
aacggcaagccccgccaggcctgcgccgctctgatcgataatctggagcagccggtgcgc
atcgagccgatgaagaccttcccggtggtgcgtgacctggtgattgaccgcagccggatg
tttggcgcgcttaaacgggtcaaggcgtggattccgatcgacggcacctatgatctcggt
cctggcccgcgtatgccggagaagaagcgccaatgggcgtatgagctgtccaagtgcatg
acctgcggcgtctgcctggaagcctgtcctaacgtcaatgaaaaaactaatttcatcggc
ccggcggccatttcacaggtccgtctgttcaacgcccatccgacaggcgagatgaatgcg
gatgagcgtctggatgcgctgatggaagacggaggcattgacggctgcggcaactcgcag
aactgcgtgcgcgcctgcccgaaaggcatcccgctcaccacgtccattgccgagatcaac
aaacagaccaccaagcatatgttcaaacgctggctgggtgtatag
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