Paenibacillus graminis: PGRAT_28510
Help
Entry
PGRAT_28510 CDS
T03325
Name
(GenBank) L-seryl-tRNA selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00450
Selenocompound metabolism
pgm00970
Aminoacyl-tRNA biosynthesis
pgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PGRAT_28510
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PGRAT_28510
Enzymes [BR:
pgm01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
PGRAT_28510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SUFBD_core
Motif
Other DBs
NCBI-ProteinID:
AIQ71099
UniProt:
A0A089NPS3
LinkDB
All DBs
Position
complement(6299022..6300125)
Genome browser
AA seq
367 aa
AA seq
DB search
MDHSLHARYGLKRVINASGRMSILGVSAQTDTVMEAMKRGGQQYVEIADLVDKSGDYIAR
LLRSEAAVVVNSASSGIALSVAAIVTGGDLRLSLRLHQEPVLKNEIIMLKGHNVQYGAPV
ETMVFLGGGRVVEAGYANEGRKEHIEQAIGDRTAAILYVKSHHTVQKNMISVEEAWEVAA
RSGVPLMVDAAAEEDLLKYVQYSDLAIYSGSKAIEGPTSGIVAGKKKYVEWVKVQLHGIG
RSMKVGKETTFGLLQALEEYQDKADNSEVEKKALEALQQLTTLHGVSVRIVQDEAGRAIF
RGRIQIDASAAGVDAKTVNDRLREGEIAVYTRDYGVKQGYFDIDPRSLQGDDLQVIIDRI
HDIVEGK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggatcactcattacatgctagatatggactgaaacgcgtaattaatgccagcgggaga
atgagtatccttggagtctccgctcaaacggataccgtcatggaggcgatgaagcgaggc
ggccagcagtatgtggagatcgcggatctcgtggataaatcgggagattacattgcccgg
ctgctccggtcagaggcagcggttgtcgtgaattcggcatccagcggcattgcgctgtcg
gtggcggccatcgtaaccggcggtgatctgcggctcagcctccgcctgcaccaggagcct
gtgcttaagaatgaaattattatgctgaagggccacaatgtgcagtacggtgctccggtg
gaaacgatggttttcctgggcggcggccgggtggtggaagccggatatgccaacgaaggc
cgtaaggagcatatagaacaagccatcggtgaccgcactgcagccattctttatgtcaaa
tcccatcataccgtccagaaaaacatgatttctgtggaagaggcctgggaggttgccgcg
cgcagcggagttccgctgatggtcgatgcggctgcggaagaggatctgcttaaatatgtc
caatattccgatcttgccatctacagcggctccaaagccattgaaggtccaacctcggga
atcgttgccggcaaaaagaaatatgtcgaatgggtaaaggtacagctgcacgggatcggc
cgcagcatgaaagtcggcaaagagaccacctttgggctgcttcaggcgctggaggaatac
caggacaaggctgacaacagtgaagtggagaaaaaagcgctggaggcgcttcagcagctg
accacacttcatggagtttcggtccgtatcgtgcaggatgaagcgggcagagccatattc
cggggacgcatccagatcgatgcctccgccgcgggagtggatgccaagaccgtcaatgac
cggttgcgcgagggcgaaattgccgtgtacacgcgggactatggagtgaagcaggggtat
ttcgatatcgatccccggtctttgcagggggatgatcttcaggtgatcatagacagaata
catgacattgtggagggcaaatag
DBGET
integrated database retrieval system
