KEGG   Paenibacillus graminis: PGRAT_29715
Entry
PGRAT_29715       CDS       T03325                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pgm  Paenibacillus graminis
Pathway
pgm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PGRAT_29715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgm03400]
    PGRAT_29715
DNA repair and recombination proteins [BR:pgm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PGRAT_29715
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PGRAT_29715
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UvrD-helicase AAA_7 AAA_5 AAA_19 AAA_16 DUF87 TrwB_AAD_bind AAA_25 DUF1995 nSTAND_NTPase5 AAA fvmX5
Other DBs
NCBI-ProteinID: AIQ71294
UniProt: A0A089NQE8
LinkDB
Position
complement(6532709..6534700)
AA seq 663 aa
MNDIVVSTQTFQLESEYTPQGDQPHAIQELVDGIRQGKKHQTLLGATGTGKTFTIAQMIS
KLNRPTLVIAHNKTLAAQLASEFKEFFPSNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYGSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASQGEHAIRVELFGDEIERITEIDVLTGEL
IGERDHVAIFPASHFVTQEETMRVALVNIERELEERLAVLRDAGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFREPGATPYTLMDYFPDDMLIVIDESHVTLPQIRAMYNGD
RARKTVLVEHGFRLPSALDNRPLQFEEFEDKVNQIVYVSATPGPYEMEHCDTMVEQIIRP
TGLLDPIIEVRPTEGQIDDLISEIRDRVERDERVLVTTLTKKMSEDLTDYFKEIGIKVRY
MHSDIKTLERMAILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSGGRVIMYGDRITDSMEKAMTETQRRRETQIAYNEKHGITPTTINKKVRD
IIEATKVAESKAEYLTGVGGKMSKKDRQSLMQRLEAEMKDAAKNLQFERAAELRDALLEL
RAE
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaatgatattgtcgtcagtacgcagacttttcaattggagtccgagtatacaccccag
ggcgatcagcctcatgccatacaagaattagtggacggcatccggcagggcaagaagcac
cagacgctgctgggagcgacaggtacagggaagacctttaccatcgcacaaatgatttcc
aagctgaaccggcctacgctggttattgcgcacaacaagacgctggccgcccaactggcg
agcgagttcaaggagttttttcccagcaattctgtagactacttcgtcagctactacgat
tactaccagccagaggcatatattccctcctcggacacctacatcgagaaagattctagc
ataaatgaagaaatagataagctgcgccactccgcgaccagttccttgttcgaacggcgt
gacgttattattgtcgccagcgtctcctgtatttacggcctcggctcgccgaaggaatat
ggaagcctgctgctgtcgctgcgggtggggatggagaagccgcggaaccagatactgagc
cggctcgtggacatccagtatcagcgcaacgacattaactttgtgcggggcacgtttcgt
gtgcgcggtgatgtggtagagatcttcccggcctcccagggcgagcatgccatccgtgta
gagctgttcggtgatgagatcgagcgcattacagaaattgacgtgttgaccggagaattg
atcggggaacgcgaccatgtggcgatttttccggcctcccactttgttacccaagaggaa
acgatgcgcgtggctcttgtcaatattgagcgggaactggaagaacggctggccgtactc
cgggacgccggcaagctgctggaggcccagcggctggagcagcgtacccgctacgatatc
gagatgatgaaggaagtcgggttttgttccggtatcgagaactattccggaccgcttacc
ttccgtgagcctggagcaacaccgtatacacttatggattatttccctgatgacatgctg
attgtaatcgacgaatcccatgtaacattgccgcagatccgcgcgatgtataacggcgac
cgggcgcgcaagaccgttctcgtggagcatggcttccgcctgccgtccgcgcttgacaac
cggccgctgcagtttgaagaattcgaagacaaggtgaatcagatcgtatatgtgtcagcc
acaccgggtccttatgaaatggaacactgcgacactatggttgagcagatcatacgtcct
accggtcttttggacccgattattgaggtgcgtccgacagaggggcagatagatgatctg
atcagcgaaatccgtgaccgggtggagcgtgacgagcgtgtgctggttacgaccctgacg
aaaaaaatgtccgaggacctgaccgattatttcaaggaaatcggcatcaaggtacgctat
atgcactccgacatcaagacgctggaacgcatggcgattctgcgtgacctccggcttggt
accttccatgttctcgtgggaatcaatctcttgcgggaaggacttgatttgcccgaagta
tccctggttgcgattctggatgccgacaaagagggctttctccgctcggagcgttcgctg
attcagaccatcggccgtgcggcccgcaactctggcggccgtgtaattatgtatggtgac
cgtatcacagattccatggaaaaagctatgaccgaaacccagcgccgccgggaaacgcag
attgcctacaacgagaagcatggcatcaccccaactacgatcaacaagaaagtgcgcgat
atcatcgaggcgacgaaagttgccgaatccaaggctgagtatctcaccggcgtgggcggc
aagatgagcaagaaggaccgccaaagcctgatgcagcgtctggaggctgagatgaaggat
gctgccaagaacctgcaattcgagcgcgccgccgagctgcgcgatgcacttctggagctg
cgggccgagtaa

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