Paenibacillus graminis: PGRAT_32405
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Entry
PGRAT_32405 CDS
T03325
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pgm
Paenibacillus graminis
Pathway
pgm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGRAT_32405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgm02000
]
PGRAT_32405
Transporters [BR:
pgm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PGRAT_32405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIQ71771
UniProt:
A0A089MD63
LinkDB
All DBs
Position
complement(7145434..7147152)
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AA seq
572 aa
AA seq
DB search
MMKRRYCGLVLTMALMLSACSGIGSERLSYGVLSNNEAEVPAAGGTITYGYSSPFQGLFE
PAFYEGEDDYQVLEFITEAMFRVNDDLTTVPGIASWQESDDHTVFTFRIRPGVRWHNGDE
LTVEDWKFALETIASPEYTGSRYYSVEMITGVEAYHKGKAKEISGIKVIDPYTLRITMNS
VRVNALDNLWPYPMNKKVYSGIAVKDMPDSDPVRKHPIGIGPFEVTNIQPGQLVEMKAFE
DYYQGKPLLDGVKYKVFDDKEIVNLLDKDVIDIATAPRDAYASLKQLDRVDILQSPELSY
EYIGFKFGSWDQETQKIVMDNPKFADKRLRQAMYYALDREGIINQYSYGLGSLIETPVPS
SSWAKIPDSEINTYPYSPERAKALLNDAGYVDKDGDGFREDPKGAPFVIHYDAMTGSTTA
EARTRAILQNWRDVGLDVRLNGGQLKDLNAFYEAVENDDPSVELFNGVWGLASDPDPSGL
WREIDLWNYPRFSSKRNEELIREGVGIKSYDKEYRKNVYYEWQKLVNDEVPMIFFAERIN
ITAVNKRLQNVRVNSMSNIIDPQTWWIKEGNE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcagatattgcgggctggtgctgacgatggcgttaatgctttcggcttgc
agcgggataggctcggagcggctttcctatggagttctttcgaataatgaggcagaagtg
cctgcagctggaggaacgattacatacggatactcctctccgtttcaagggctgtttgaa
cctgctttttatgaaggcgaggacgactaccaggtactggaattcattacagaagctatg
tttagagtaaacgatgacttaaccacggttccgggtatcgcttcctggcaggaatcagac
gatcataccgtgttcacgttcagaataaggccaggcgtccggtggcacaacggcgatgaa
ttaacggtagaggattggaaattcgcgctagaaaccattgccagtccagagtatacgggg
tcacggtactatagcgtagaaatgatcacaggcgtggaagcctatcataagggaaaagcc
aaggaaatcagcgggattaaggtaatcgatccttacaccctgagaataaccatgaatagt
gtaagggtgaatgcactggataatctgtggccgtacccgatgaacaaaaaagtgtacagc
gggatcgcggttaaggatatgccggacagcgatccggtgagaaagcatcccatcggcatt
ggcccctttgaagtgaccaatatccagcctggacagctggtggagatgaaggcctttgag
gattactatcagggaaaaccgctattggacggtgtgaagtataaggtgttcgatgataag
gaaatcgtgaatcttcttgataaggatgtcattgatatcgctactgccccgcgtgatgcg
tatgcttcgctgaaacagctggaccgggtggatattctgcagtcgcctgagctgtcttac
gaatacataggattcaaatttggatcttgggatcaagagacccagaagattgtcatggat
aatccgaaattcgcggataaacgcctgcggcaggctatgtattatgcgttggatcgtgaa
gggatcattaaccaatattcctacggtcttggcagtctgattgaaacaccggtccccagc
tcaagctgggcgaaaattcccgattcagaaatcaatacgtatccctacagtccggagagg
gccaaggcgctgctgaatgatgcaggatacgtggacaaggatggcgatgggttccgggag
gacccgaaaggcgctccgtttgttattcattatgatgctatgacgggaagcacaacggca
gaagcaaggacccgcgctattctgcagaattggcgtgacgttggactggatgtacgctta
aacggcggacagcttaaggatcttaatgctttctatgaagctgtagagaatgatgacccc
tcagttgagctcttcaacggggtatgggggctggccagcgacccggacccgtcgggttta
tggagagaaattgatctgtggaattacccgcgcttcagttcaaaacgcaatgaggaattg
attcgggaaggcgtgggaatcaaatcttatgataaagaataccgtaagaacgtctattac
gaatggcaaaaattagtgaatgacgaagtgccgatgatcttttttgctgagcgcataaat
ataacggccgtcaacaaacgtctgcagaacgtgagggttaattcgatgagcaacatcatt
gacccgcagacatggtggataaaggaaggaaatgaataa
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