Porphyromonas gingivalis ATCC 33277: PGN_0034
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Entry
PGN_0034 CDS
T00714
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn03030
DNA replication
pgn03430
Mismatch repair
pgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGN_0034
03430 Mismatch repair
PGN_0034
03440 Homologous recombination
PGN_0034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgn03032
]
PGN_0034
03400 DNA repair and recombination proteins [BR:
pgn03400
]
PGN_0034
Enzymes [BR:
pgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGN_0034
DNA replication proteins [BR:
pgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGN_0034
DNA repair and recombination proteins [BR:
pgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGN_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BAG32553
UniProt:
B2RGQ8
LinkDB
All DBs
Position
complement(41048..44734)
Genome browser
AA seq
1228 aa
AA seq
DB search
MEPFVHLHVHSQFSLLDGQAAINDLVDKAIADGMPGIALTDHGAMFGIKEFYNYVEKKNS
GHNATLKDCRRELDQLNDSKSADMLTDEERNRIVKLQQKIEETKKLLFKPILGCEAYCAR
RTRFDKDNQIPDPYHPRRSIDASGWHLILLAKNLRGYKNLIKMVSYSWTEGQYYRPRIDR
ELLQKYHEGIIVSSACLGGEIPQHIMAGEIAKAEEAILWFKELFGDDYYLEVQRHETHNP
LGNQDVFPQQQRVNRVILELGKKLGVKVIATNDVHFCNEEDAEAHDRLICLSTGKDLDDP
NRMRYTKQEWMKTTAEMSAIFEDLPETLSNTLEILDKVEFYSIDNKALMPDFPIPPEYKD
DDDYLRFLTYEGARRKYGEDLSDEIKERIDFELETIKGMGFPGYFLIVQDFIAAARSMGV
SVGPGRGSAAGSAVAYCLGITDIDPIKYHLLFERFLNPDRISMPDIDVDFDDDGRAEILR
WVTEKYGKERVAHIITYGTMATKSSIKDVARVQRLPLPESNRLAKLVPDKIPGEKKVNLK
KAIEFVPELKQASLSSDKVMRDTLKYAQMLEGNVRNTGVHACGIIIGKTDISDVVPVSTA
PDKDTKEELLVTQYEGSVIEQTGLIKMDFLGLKTLSIIKEALVNIKRRHGIDLNIDTIPL
DDPLTYKLYSDGRTIGTFQFESGGMQKYLRELQPSAFEDLIAMNALYRPGPMDYIPSFIA
RKHGREPIDYDLPEMEEYLKETYGVTVYQEQVMLLSRKLAGFTRGQSDELRKAMGKKLIE
KMNVLKVKFLEGGNKNGHPEEVLEKIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANY
PAEYMAGALSRNLNNITEITKLMDECKSMKIGVLVPDVNESEMKFSVNANGDIRFGLSAV
KGVGSGAVEQIIAEREANGLYKDIFDFVERINLSACNRKTMESLALAGAFDSFALSREEY
MAPPLTGREESYIQALMRYGSVVQEEKHSQSNSLFGEEEDLMIPRPQPSPTEPWNDLERL
NKERELVGLYLSSNPMAQYQVILDHYCNTHAADLTDPDSLVGKNLVLAGIVTKAFQGISR
SNNPYSKITLEDLSGTGEIPLFGQAHVNFGNYCKEGLYLLIRASVQPHKWKEGEMELVVT
SIELLPQVADTLIKKMTILLPASKIDNELIEMLSDELTNNSGKTMLFIKVYDHTETFDVE
LAQQKSLIKVSPELVNRLKTYEINFALE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttcgtacacctgcacgtacactcccaattctctctgcttgacggacaggcc
gctatcaatgatttggtggacaaagccattgccgacggtatgccgggtattgctctgacc
gatcatggagccatgttcggcatcaaggagttttacaactatgtggagaagaagaacagc
gggcacaatgcgacattgaaggactgtaggcgcgaactggatcaactgaacgactcgaag
agtgccgacatgctgaccgatgaagagcgcaaccgcattgtcaagttgcagcagaagata
gaggagaccaaaaaactcctcttcaaacctatccttgggtgtgaggcatattgtgcccga
cgtacgcgattcgacaaggataaccagataccggatccgtatcatcccagacgctccatc
gatgccagcggttggcacttgatcctgctggcaaaaaacttgcgagggtacaagaatctg
atcaaaatggtcagctattcatggacagaagggcagtactaccgtccgcgtatcgacagg
gagcttttgcagaagtatcatgaaggtatcattgtctcttcggcctgtctgggaggagag
ataccacagcatatcatggcaggagagattgccaaggctgaggaggccatcctctggttc
aaagagctttttggggacgattactatttggaggttcagcgacacgagacgcataatcca
ctcggcaatcaggatgttttcccccagcaacagcgtgtaaatcgcgtcatactggagctt
ggcaagaagttgggtgtcaaagttattgcgacgaacgatgtccatttctgcaatgaagaa
gatgctgaggcgcacgaccgtctgatctgtctgagcacagggaaggatctggacgatccg
aacaggatgcgctataccaagcaggaatggatgaagactacggcagagatgagcgccata
ttcgaggatctacctgagactctttccaacacattagaaatacttgacaaggtagagttc
tacagcatcgacaacaaagccctgatgccggattttcctatcccccccgaatataaagac
gatgatgactacctgcgtttccttacctacgaaggtgccaggcgcaagtatggagaggat
ctttccgatgagataaaagagcgtatcgactttgaactggaaaccatcaaaggaatgggg
ttccccggctacttccttattgtacaggatttcattgcagccgcacgaagtatgggcgtc
tctgtcggacccggccgaggatcggcagccggttcggcggtagcttactgtttggggatc
acggatatcgatccgatcaagtaccatttgcttttcgagcgttttctcaatccggatcgt
atctccatgcccgatatagacgtcgacttcgatgatgacgggcgtgccgaaatactccgc
tgggtgacggaaaaatacggcaaggagagagtggcccacatcatcacctacggtacgatg
gccacaaagagttctattaaggatgtggctcgcgtacagaggctgcccttacccgaaagc
aatcgtttagccaagctcgtaccggacaaaattcccggagagaagaaagtcaatctgaag
aaagcaatcgaatttgttccagagctgaagcaagcatcgctaagctccgataaggtaatg
cgcgataccctgaaatacgcccaaatgctggaggggaatgtgcgcaatacaggtgtgcat
gcctgcggtatcatcattgggaaaacggatatcagcgatgtcgttccggtcagtacggct
ccagacaaagacacgaaggaggagctgctggtcacacaatacgaaggctctgtcatcgaa
cagacgggactgatcaaaatggacttcctcgggctgaaaacgctctcgatcatcaaagaa
gctttggtcaacataaagcggcgccatggcattgacttgaatatagacacgatccctctc
gacgatcctcttacatataagctatacagcgatggacgtaccataggtactttccaattc
gaatccggtgggatgcaaaagtatcttagggagctacagccctctgctttcgaggacttg
atagcgatgaatgctctctatcgtcccggtccgatggactatatcccttcttttatcgca
cgcaagcatgggcgtgagcctatcgattacgacctgcctgagatggaagaatatctcaaa
gaaacttatggtgtgacggtgtatcaggagcaagtcatgcttctgagtcgcaagcttgcc
ggttttacccgaggccagagcgatgagcttcgtaaggctatgggcaaaaaactcatcgaa
aagatgaatgttctgaaggtgaagtttctcgagggggggaataagaatggacatccggaa
gaagttctggaaaagatctggacagactgggagaagttcgccagctatgctttcaacaag
agtcatgccacctgctacagttgggtagcctaccaaacggcttacctgaaagcgaactat
cctgctgaatatatggcaggagcattgagccgaaacctgaataacatcacggaaataacc
aagctcatggatgagtgcaagtccatgaagatcggcgtattggtaccggatgtgaacgag
tccgaaatgaaattctcagtaaatgccaatggggatattcgctttggtctcagcgctgta
aagggtgtaggatcgggagccgtcgagcagatcattgccgaacgcgaagccaacgggcta
tataaggacatcttcgactttgtggagcggatcaatctctctgcctgcaatcgcaagacg
atggagagtctggccttggccggtgctttcgacagcttcgctctatcccgggaggaatat
atggctcctcctctgacaggaagagaggagtcgtacatacaagcacttatgcgctatggg
tccgtagtacaagaggagaagcacagccagagcaattccctcttcggagaggaagaagat
ctgatgattcctcgtccgcagccatctcccaccgagccatggaacgacttggaaaggctc
aataaagaacgtgaactcgtagggctctaccttagttccaatccaatggctcagtaccaa
gtcattctcgatcactattgcaatacccatgcagccgatttgactgatccggattccttg
gtcgggaaaaatttggttttggccggtattgttaccaaggcttttcagggaatctctcgc
tcgaataatccgtactcaaagattacgttagaggatctgtccggcacgggcgaaatacct
cttttcggacaggctcatgtaaacttcggcaattattgcaaggaggggctgtatctcctc
attcgcgcatccgttcagcctcataagtggaaagagggtgaaatggaattggtcgtgacc
tcaatcgaactgctacctcaagtggccgatacattgatcaaaaagatgacgatcctactg
ccggcatcgaagatcgacaatgagctgatcgaaatgctgtctgacgaattgacaaacaat
tcggggaaaacgatgttatttatcaaagtgtatgaccatacggagactttcgatgtcgaa
ctggcacagcagaaatcgctgatcaaagtgtcccccgaactggtgaatagattgaagact
tatgagattaactttgcacttgaatag
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