Porphyromonas gingivalis ATCC 33277: PGN_0894
Help
Entry
PGN_0894 CDS
T00714
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn03030
DNA replication
pgn03430
Mismatch repair
pgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGN_0894
03430 Mismatch repair
PGN_0894
03440 Homologous recombination
PGN_0894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgn03032
]
PGN_0894
03400 DNA repair and recombination proteins [BR:
pgn03400
]
PGN_0894
Enzymes [BR:
pgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGN_0894
DNA replication proteins [BR:
pgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGN_0894
DNA repair and recombination proteins [BR:
pgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGN_0894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
RCF1-5-like_lid
AAA_22
AAA_5
AAA_14
AAA_30
DEAD
DNA_pol3_delta_C
AAA_16
AAA_24
AAA_assoc_2
AAA_19
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BAG33413
UniProt:
B2RJ68
LinkDB
All DBs
Position
992947..994755
Genome browser
AA seq
602 aa
AA seq
DB search
METKYIVSALKYRPDSFASMVGQEALSATLKSSIVQQKTAHAYLFCGPRGVGKTSCARIF
ARAINCLERLPDGEACGRCESCKAFDEQRSMNIYELDAASNNSVDDIRLLIEQANVPPQI
GKYKIYIIDEVHMLSQQAFNAFLKTLEEPPSYVIFILATTEKHKILPTILSRCQIFDFKR
IPPARIEQHLRYVADSEGIKAEAEALAIIATKADGGMRDALSLFDRIARFSEGNITYANT
IENLNILDYDYYFRLTDFFLQGDYRSVLIVLDELLAKGFDGQVIVSGLASFFRDLMMAQD
ASTLPLLEQSEVVIQRYVDMAARCPTSFLYQSLKILNACDQQYRQSNGKRLLLELSLMNI
AALFSKGLTAPPPTHGAQHANPAVSGSVSPRPAPAKEQPSVAPSQSSVPPQPSIGEQRRQ
PETTAPTITEDKPEQTKVVPPTRPMATSTVGSEGRFTLRGIRNKQEQLQNNIQEVRTEMT
ESFDEEQLQLAWIEFAETKLSEEIHLKETMANCLPKLRPGTSAFEVEVLNSRQEEEINNV
SARLLSFLADKLCNTTIRMNVRVSESTSLNRVPVSLDEKIECLNQENPLFDELRMRLGLS
LV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaatacatcgtatctgcactcaaatatcgccccgattcttttgcctcgatg
gtcggtcaggaggcattgtccgctacactcaaaagctccatcgtacagcaaaagacagct
cacgcctatctcttttgtggcccgcgtggggtgggaaagacctcttgtgcacgcatcttc
gcccgtgccatcaactgtctggagcggttgccggatggagaagcttgtgggcgatgcgag
tcgtgcaaggctttcgatgagcagcgatccatgaatatatatgaactggatgccgcttcg
aacaattcggtagatgatattcgtctcttgatagagcaggccaatgtgccgccacagatc
ggaaaatacaagatctacatcatcgacgaggtacacatgctctcgcagcaagccttcaat
gctttcctgaagactctcgaagaaccgccttcttatgtgatctttatattggctaccaca
gagaagcacaagatcctgcccactattctctcgcgctgtcagatattcgacttcaaacga
ataccaccggcccgaatagagcaacatttgcgctacgtagcagacagcgaggggataaaa
gccgaagcagaagctttggctataatagcgacaaaagccgatggagggatgcgcgatgct
ctttcgctcttcgaccgcattgcccgtttttcggaaggcaatattacctatgccaatacg
atagagaatctgaatatcctcgactacgattattatttccgtctgacggatttcttttta
cagggggattaccgatccgtattgatcgtgttggacgaattgcttgccaagggattcgac
ggacaggtgatcgtgagcggattggcttctttcttccgcgatttgatgatggctcaggac
gcttctaccttgccgctgttggagcagtccgaagtagtcatacagcgatatgtggatatg
gcagcacgttgcccgacttctttcttataccaatcgctcaagatactgaatgcctgtgac
cagcagtatcgccagagcaatggcaagcgtctgttgttggagttgtcgctgatgaatatc
gcggctttatttagcaagggactgactgctccgcctccgacccatggagcacagcacgca
aatcccgcggtgagcggatcggtatctccccggccggctccggccaaagagcagccatcc
gttgctccatcacagtcctctgtcccacctcagccgagtatcggggagcagcgacgccaa
cccgagaccactgctccaactatcacggaagacaagcccgaacagacgaaagtggtacct
ccgacgcgcccgatggcaacatctactgtcggatcggaaggccggtttacattaagggga
atccgcaataagcaggaacaactccaaaataacattcaggaggttcggacagagatgacc
gaatcattcgatgaggagcagttgcaactggcttggatcgaatttgccgaaacgaagctc
tcggaggagattcacctgaaagaaacgatggctaactgtcttcctaaactccgtcccgga
acttcggcttttgaagtggaggtgctcaatagcaggcaagaggaagaaatcaataacgta
tcggctcgtttgctgagcttccttgccgataagctgtgcaatacgacgatacgaatgaat
gtgcgagtatccgaatctacatctctgaaccgagtgcctgtctctttggacgaaaagatc
gaatgcctcaatcaggaaaatcctctttttgatgagcttagaatgcgtcttggccttagt
ctggtatag
DBGET
integrated database retrieval system
