Porphyromonas gingivalis ATCC 33277: PGN_1194
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Entry
PGN_1194 CDS
T00714
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn00300
Lysine biosynthesis
pgn00470
D-Amino acid metabolism
pgn00550
Peptidoglycan biosynthesis
pgn01100
Metabolic pathways
pgn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PGN_1194
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGN_1194
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGN_1194
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PGN_1194
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgn01011
]
PGN_1194
Enzymes [BR:
pgn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PGN_1194
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PGN_1194
Peptidoglycan biosynthesis and degradation proteins [BR:
pgn01011
]
Precursor biosynthesis
Amino acid ligase
PGN_1194
Racemase
PGN_1194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
BAG33713
UniProt:
B2RK18
LinkDB
All DBs
Position
1326445..1328916
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AA seq
823 aa
AA seq
DB search
MFLFSELCRRLSPDAVRIVSDHRIVHLLTDSRTLSEPATTLFFALRTTSGDGHLYIRDLY
DKGVRSFVISDPSKDLMEKMPQANWMRVAHPLDALQRIAALRRSMFDIPVIGITGSNGKT
IVKEFLYQLLRKDYRIVRSPRSYNSQIGVPLSVWQMAEEHTLGIFEAGISQMGEMERLES
IICPSYGIITNIGGAHQENFPDIKTKLEEKLRLFPHCHTIVYNGDCEEIAAAISFCGLAR
AGVSWSRTKPEAHLYVCRLESKDNRTEIDFRCLGKDYSLVLPFTDAASIEDIIHCITLIS
VLCPEVLSARKRFASLEPVEMRMEVKAGDHGNTIINDVYSNDVYSLTLALDFQRRRTAET
CLKKVLILSDILQSGMPPEELYRHVAGQLQVYALDFFVGIGEEIASHRTCFAGMSAVFFK
DVAAFLTSGEIERFSNSCILLKGARKYRFEQITERLVQQVHETALRINLSAIIHNLNFYR
NLVPSGTKTICMVKAQGYGVGSYELVKTLQEHRVDYIAVAVADEGKELRERGISMPIVVM
NPQRNAFQTLIDYGLEPEIYSFALLASFSETVVRNGLVGYPVHIKIDTGMHRLGFLPSDM
TRLGEILAKDAGLSIRSVFTHLAGADDPDLDDFTRSQLLSFDAAFASLSSLLGYIPLRHV
LNTAGVERFADYHADMIRLGIGLYGVTASGVQGLRPVATLMTTILQIKDISSSDTVGYGR
KGRVQQPSRIAIIPIGYADGLDRRLSCGVGEVLVRGHRCPIVGNVCMDICMIDVTGMPAE
EGDPVVVFGEELPIEEVAHKMNTIPYEVLTGISPRVRRVYFQE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttttctccgaactatgcagacgtttatcccctgatgcggtaagaatcgttagc
gatcaccggatcgtccatttgcttaccgatagccgtacgctgtccgaacctgctactact
ctcttcttcgccttacgcaccacatcgggcgatggccatttgtatattcgagatctatat
gataaaggagtaaggagttttgtcatttcggatccctccaaagatttgatggagaaaatg
ccgcaagcgaattggatgcgcgtggctcatccgttggacgctctacaacggatagccgca
ctaaggcgttctatgttcgatattcctgtgataggaattaccggaagcaatggcaagaca
atcgtcaaagagttcctttatcagttattgcgcaaggactatcgcattgtccgctcgccc
cgaagctataactcgcagatcggagtacctctttccgtatggcaaatggcggaggaacac
actctcggtatatttgaagccggcatatcgcaaatgggggaaatggaacgtttggagagc
ataatatgcccctcgtatggtatcattacgaatataggaggtgctcatcaggagaatttc
ccggatataaaaacgaaactggaggaaaagcttcgcttgttcccccattgtcatactatt
gtctataacggcgactgcgaagagatagctgctgctatctctttctgcggtttggcaaga
gccggagtttcatggagccggacgaagcccgaagctcatttgtatgtgtgcagattggaa
tcgaaagataatcgcaccgagattgattttcggtgtctcggcaaagattattctcttgtg
ctaccattcacagatgctgcttccatagaagatatcatccattgcatcacgctgatttct
gtactgtgtccggaggtcttatctgctcgaaagcggtttgcgagtttagagcctgtagaa
atgcgaatggaggttaaggccggagatcatggcaatacgatcatcaatgacgtttacagt
aatgatgtctattcgcttacgctggccttggatttccaacgaagacgtactgccgaaaca
tgcctaaagaaagtgttgatactgtccgacatcttgcaaagcggaatgcctcccgaagaa
ttgtacagacatgtggcaggacaattacaagtctatgctcttgactttttcgtcggcatc
ggagaggaaatagcctcgcatcgcacttgttttgccggcatgtctgccgtttttttcaaa
gatgttgctgcattcttgacatccggtgagatagagcgcttctccaacagctgtattctg
ctcaaaggtgcacgcaagtatcgcttcgaacagattacggagcgacttgtacaacaggtg
cacgaaactgcgctaaggatcaatctgtcagctatcatccacaatcttaatttctatcgg
aatttagttccatcaggcaccaaaaccatctgcatggtcaaggctcagggctatggcgta
ggctcttacgaacttgtcaaaaccctgcaggagcatcgtgtggattatatagctgtagcc
gtagcggacgaaggcaaagaactaagagagcgaggtatcagtatgcctatcgtggtcatg
aacccccaaaggaatgcctttcagacactcatagactacggattagagcctgagatttat
agctttgcccttctcgcttctttttcggaaacggtcgtacgcaacggcctcgtgggctat
cctgttcatatcaaaatcgacacgggaatgcaccggcttggttttttaccgtctgatatg
acacgactcggtgagattcttgccaaagatgccggactgagcattcgctctgtatttact
catcttgcaggtgccgacgatcctgatttggatgattttacgcgatctcaactgctgtct
ttcgatgctgctttcgcctctctctcctctttattaggctatatacctctccgtcatgta
ttgaatacggcaggggtagagcgttttgccgactaccatgccgacatgattcgtcttggc
atcggcttgtatggagtaacggcatccggcgtacaaggattgagaccggtagccaccctg
atgactacaattttgcagatcaaggatatttcttcgagcgatacggtcggatatggacgt
aaaggacgggtacaacaaccatctcgaatagctattatacctatcggttatgccgatggc
ttggatagacgtttgagttgtggagtaggagaagtacttgtgcgtggacatcgctgtcct
atagtagggaatgtctgtatggatatctgtatgatagatgttaccggtatgccggcagaa
gagggagaccctgtcgttgtattcggagaagaactcccgatcgaagaagttgcccataag
atgaatactatcccctatgaggtgctcacgggtatctcgcctcgtgttcgcagagtttat
ttccaagagtag
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