Porphyromonas gingivalis ATCC 33277: PGN_1393
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Entry
PGN_1393 CDS
T00714
Name
(GenBank) putative DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgn03032
]
PGN_1393
03036 Chromosome and associated proteins [BR:
pgn03036
]
PGN_1393
03400 DNA repair and recombination proteins [BR:
pgn03400
]
PGN_1393
DNA replication proteins [BR:
pgn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PGN_1393
Chromosome and associated proteins [BR:
pgn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PGN_1393
DNA repair and recombination proteins [BR:
pgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PGN_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
FliG_N
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAG33912
UniProt:
B2RKL7
LinkDB
All DBs
Position
complement(1548072..1548350)
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AA seq
92 aa
AA seq
DB search
MTKADVVNAIAKSTGIDKETTLKVVESFMDTIKDSLSEGDNVYLRGFGSFIVKERAEKTA
RNISKQTTIIIPKRNIPAFKPSKIFMSQMKQD
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagctgacgtagtgaacgctattgcgaagtcgacagggattgataaggaaacg
accctgaaagtcgtagagtcgttcatggacactatcaaagactccctttcggaaggtgat
aatgtatatctccgcggatttggtagcttcattgtgaaggaaagagctgagaagacagca
cgtaatatttcgaagcagacgactatcatcatccccaaaaggaatattccggcgtttaag
ccttcgaaaatctttatgagtcagatgaaacaagactaa
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