Porphyromonas gingivalis ATCC 33277: PGN_1551
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Entry
PGN_1551 CDS
T00714
Symbol
recQI
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGN_1551 (recQI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgn03019
]
PGN_1551 (recQI)
03400 DNA repair and recombination proteins [BR:
pgn03400
]
PGN_1551 (recQI)
Enzymes [BR:
pgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGN_1551 (recQI)
Messenger RNA biogenesis [BR:
pgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PGN_1551 (recQI)
DNA repair and recombination proteins [BR:
pgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGN_1551 (recQI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
BAG34070
UniProt:
B2RL25
LinkDB
All DBs
Position
1736957..1739134
Genome browser
AA seq
725 aa
AA seq
DB search
MDIVLAEKLQRHFGFDRFKGNQEAIIRNVLAERNTFVLMPTGGGKSLCYQLPAMLMTGTT
IVVSPLIALMKNQVDAMRSFSAKDGVAHFMNSSLNKTQLERVKNDVRDGLTKLLYVAPES
LTKEENIAFLREIDISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPRSIIALTATAT
PKVQHDIQKNLGLMDADVFKSSFNRPNLFYHIRPKTQDVDRDVVKYILSQPGKSGIVYCM
SRNKVTTFAQVLQANGIKALPYHAGLDAGERASNQDAFLNEEISVIVATIAFGMGIDKPD
VRYVIHYDMPKSLEGYYQETGRAGRDGGEGECIAFYRPKDLQRLEKFMQGKPISEQEIGR
QLLAETAAFAESRVCRRKLLLHYFGEDYTQENCGACDNCTSTYKQVEAKELLLNVLETVS
ALKEQFKTEYVVNVLMGELTPDIESFGHQDLEVFGIGSDETETTWTAVIRQALLSGYLSR
DIENYGLLKVTAKGKKFALKPVSFKIVDENEEDEDDDAPKVGGRGSGGAMDPVLFAMMKD
LRKKLGASLKLPPYVIFQDPSLEAMATFYPVTIEELQNIPGVGVGKATRYGKEFLDLIRR
HVEENEIERPEDMRVRTLANKSKMKVSIVQQIDRKVALDDIAVSHGLDFPELLSEVETIV
YSGTRINIDYFINEVMDEDHLEDIFEYFKESTTDSLEEAMQELGKDYSEEEIRLVRIKFL
SEMAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacattgttctggccgaaaaattacagcggcattttggatttgaccgattcaaaggc
aatcaggaggctatcataagaaatgtattagccgaacgaaacacttttgtgctgatgcct
acgggaggtgggaaatccctatgctaccaattgccggccatgctcatgaccggcacgacc
atcgtagtctctccccttatcgctctgatgaagaatcaggtggatgccatgcgtagcttc
agtgccaaggatggggtcgctcactttatgaattcttctttgaataagacacagctcgaa
cgtgttaagaatgatgtacgtgatggacttaccaagctgttgtacgtcgctcccgaatca
ttgacaaaagaagaaaacattgcttttctgcgtgaaatagatatttcgttttacgctata
gacgaagcccattgcatatcggaatgggggcatgacttcagacccgaatacagacggatt
cgtcctatcatcaatgagatagggccccgatcgatcatcgctttgacagccacggctacc
ccgaaagtacagcatgatattcaaaagaatcttggtttgatggatgccgatgtattcaaa
tcgtctttcaatcgtcccaatcttttttatcatatacgtcctaaaacacaggacgtagat
cgtgacgtagtcaaatacatcctatcccagccgggaaagagcggtattgtctattgcatg
agtcgaaataaagtaactacttttgcccaggttttgcaggccaatgggatcaaagccctt
ccctatcatgcgggacttgacgccggagagcgagcgagcaatcaggatgcttttctgaat
gaagagataagcgtgatcgttgccaccattgcttttgggatgggtattgacaagccggat
gttcgctacgtcattcactatgatatgcccaaaagcttggaagggtattatcaggaaacg
gggcgtgccggtcgagatggaggagaaggcgaatgtattgcattctatcgccccaaagac
ctgcaacgtttagagaaattcatgcaaggcaagcccatatccgagcaggaaatcgggcgt
cagctattggccgagactgcagcatttgcggagagcagagtgtgtaggcgcaagctgctt
ctccactattttggagaggactatactcaggaaaactgcggtgcatgtgataattgtacg
agtacgtataagcaagtggaagcaaaggaactattgttaaacgttttggaaacagtttct
gctttgaaggaacagttcaaaacggagtatgtcgttaatgtattgatgggcgaattgact
cctgatatagagtcattcggacatcaggatttagaggtcttcggtatcggaagcgatgaa
accgagacaacatggacagccgtcatcagacaagcactgctttccggctatttgagtcgg
gacatcgaaaattatggtctgctgaaagtgacagccaaaggcaagaagtttgccctcaaa
cctgtttctttcaagatcgtcgatgagaacgaagaggacgaggatgacgatgctcctaag
gtgggagggcgaggttccggtggggccatggatccggtcctgttcgccatgatgaaagac
ctcagaaagaaattgggagcatctctcaagttgcctccctacgttatcttccaagatccc
tcattggaggctatggctacgttctatcccgttacgatcgaagagctgcagaatattccc
ggcgtgggtgtcggcaaggctactcgctatgggaaagaattcctcgatctgatccgtcgt
cacgtagaggaaaacgagatcgaacgtccggaggatatgcgtgtacgtacactcgccaac
aaatcgaagatgaaagtctccatcgttcagcaaatcgatcgtaaagtagctttggacgat
atagcggtgagccatggattggattttccggaattgctgtcagaagtcgagacgatagtc
tactccggtactcgaatcaatatcgactacttcatcaacgaggtcatggacgaggatcat
ttggaagatatattcgagtatttcaaagaatccacgacagactctttggaggaggctatg
caagaactcggtaaggactattcggaggaagagattcgtttggtacggatcaagttctta
tccgaaatggcaaactaa
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