Porphyromonas gingivalis ATCC 33277: PGN_1564
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Entry
PGN_1564 CDS
T00714
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGN_1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgn03019
]
PGN_1564
Messenger RNA biogenesis [BR:
pgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PGN_1564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
DUF641
Motif
Other DBs
NCBI-ProteinID:
BAG34083
UniProt:
B2RL38
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All DBs
Position
1751085..1752626
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AA seq
513 aa
AA seq
DB search
MGIGTLLLFTFLGLVAGATAVWLITRTLLKQRTEGILAEARREAEVIKQKKLLEVKEKFL
QLKGDLEKQVAQRNSKLQSVESKLKSREQTLNQRQEDITKKGQEMDLMRENLTAQLSVIE
KKKTELDELKTREQAHLESLSGLSAAEAKDRLVESLKDEAKGQASAYVNEIIEEAKMTAN
KEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAAAGIEIIVD
DTPEAIVLSGFDPVRREIARLALHQLVQDGRIHPARIEEVVSKVRKQVEEEIIETGKRTV
IDLGIHGLHPELIRLIGKMKYRSSYGQNLLQHSRETANLCAIMASELGLNPKKAKRAGLL
HDIGKVPDDEPELPHALLGMKLCEKFKEKPDICNAVGAHHDEVEMMSLIAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEQLAMSYPGVIKTYAIQAGRELRVIVGADKTDDASVETL
SNEIAKRIQDEMTYPGQVKITVIRESRSVSYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggaataggaacacttttattatttacttttttggggcttgtagccggtgccactgcc
gtatggctgatcacgcggacactgctcaagcaaaggacagaggggattctcgccgaggct
cgccgtgaagccgaggtaatcaagcagaagaagctcctcgaagtgaaagagaaatttctc
caactcaaaggcgacctggaaaagcaggtggcacagcgcaatagcaagctccaatcggtg
gagagcaaactcaaaagccgcgaacaaaccctcaaccaacgtcaggaagatataacgaag
aaggggcaggaaatggatttgatgcgtgagaatctgactgctcaactctctgtgattgaa
aagaaaaagacggaactcgacgagctgaaaactcgcgaacaggctcatctggagtctctg
agcggactctccgctgccgaggctaaagacagactggtggaaagcctcaaagatgaagcc
aaaggacaagcctctgcatacgtcaatgagattatcgaagaggccaagatgactgccaac
aaagaggccaagcgaatcgtcatccaatccatccagcgcgtggctacggagacggccatc
gaaaactccgtgaccgtcttccatatcgaaagcgacgagatcaaggggcgtatcatcggc
cgagagggccgcaacatccgtgcattggaggctgctgccggtatagaaatcattgtagac
gatacgccggaagcgatcgtcctatcgggattcgatccggtgcgtcgtgagatagcgcgt
ctggcactgcaccagttggtacaggatggacgtatccacccggcacgcatagaagaggtg
gtatccaaagtaagaaaacaggtggaagaagagatcatcgagacgggcaaacggacggtg
atcgaccttggaatccacggtctgcatccggaactgatccgtctgatcggtaagatgaag
tatcgctcttcctatgggcagaatctcttgcagcattcgcgtgagacagctaacctctgt
gccataatggccagcgaattggggctgaatccgaagaaagccaaacgcgccggtctgctg
cacgacatcggcaaggtgcccgacgatgagccggaattgccacacgctctcttgggcatg
aagctctgtgagaagttcaaagagaaacccgacatatgcaacgccgtgggagcgcaccac
gatgaggtggaaatgatgtcgctcatagctcctatcgtacaggtgtgcgacgccattagc
ggcgcacgtccgggagcacgccgtgagatcgtggaagcctatatcaagcgtctgaatgat
ctggagcaactcgccatgtcctatccgggcgttatcaagacctatgctattcaggccggc
cgcgaactccgtgtgatcgtcggtgccgacaagacggacgatgcctcggtggaaacgctc
tcgaacgaaatagccaaaagaatccaggacgagatgacctaccccggacaagtgaagatc
acggtgatccgcgaatctcgctccgtcagctacgccaaataa
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