Porphyromonas gingivalis ATCC 33277: PGN_1841
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Entry
PGN_1841 CDS
T00714
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Pathway
pgn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGN_1841 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgn03021
]
PGN_1841 (rpoA)
03400 DNA repair and recombination proteins [BR:
pgn03400
]
PGN_1841 (rpoA)
Enzymes [BR:
pgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGN_1841 (rpoA)
Transcription machinery [BR:
pgn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PGN_1841 (rpoA)
DNA repair and recombination proteins [BR:
pgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PGN_1841 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_5
Glyco_hydro_81
SAM_EPH
DUF3281
Motif
Other DBs
NCBI-ProteinID:
BAG34360
UniProt:
B2RLW5
LinkDB
All DBs
Position
complement(2070010..2071002)
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AA seq
330 aa
AA seq
DB search
MAILAFQKPENVLMMETSDSIAKFEFKPLEPGYGITIGNALRRILLSSLEGFAITAIKIE
GVEHEFATIPGVLEDVTNIILNLKQVRFKQIVPNADVEKATIVISNSEVFRAGDLNAQLS
NFEVLNSNLVICHLDKSATLTMEFSINKGRGYVSAEENRAEHNELSTIAIDSIYTPIRNV
KYAVENFRVEQKTDYEKLLMEVTTDGSIRPVDALREAAQILISHFSLFAENKIAIEYVDI
VDTDEFDEDSLHMRQLLKSKLSGLDLSVRALNCLNAAGVDTLGDLVSLSRSDLMKIRNFG
KKSLTELDELLATLNLSFGMDISKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcatttcagaaacccgaaaatgtattgatgatggagacgtcggactcg
atcgccaagttcgagttcaaacctttggagcccggttatggtattaccattggcaatgcg
cttcgtcgaatactcttgtcttcgcttgaaggttttgcgattactgcaatcaagattgaa
ggtgtagagcatgaatttgctactattccgggtgtattggaggacgttactaatattatc
ctcaatctcaaacaagttcgttttaagcagattgttcctaatgccgatgtagagaaagct
acaattgttatctctaattcggaggtgttccgtgccggtgatttgaatgcacaactttca
aactttgaagtgttgaattcgaatcttgtcatttgccacctcgataagtcggctacgctt
actatggagttttccataaataaggggcgtggctatgtgtcggcagaagagaatcgcgca
gagcataatgagctttccacgatagcgatcgactcaatctatacgcctattcggaatgtc
aagtatgcggtagagaatttccgcgtagaacagaagactgattacgaaaagctcctgatg
gaagtgaccacagatggttcgatccgtcctgtagatgctcttcgtgaagcagctcaaatc
ttgatatcccacttctctctgtttgcagagaataagatagcgatagagtatgtggatata
gtcgatactgatgagttcgatgaagattctctgcatatgcgtcaactattgaagtcaaag
ctttcaggtcttgacctgtctgttcgtgccctcaattgtctgaatgcagccggagtagat
acgttgggcgatttagtgagtctgtcacggagcgatctgatgaagattcgcaacttcgga
aagaagtctttgactgagcttgacgaactgctggcaacgctgaatttgtcgtttgggatg
gatatcagtaagtataaattagataaagactaa
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