Porphyromonas gingivalis ATCC 33277: PGN_1961
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Entry
PGN_1961 CDS
T00714
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pgn
Porphyromonas gingivalis ATCC 33277
Brite
KEGG Orthology (KO) [BR:
pgn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pgn02048
]
PGN_1961
Enzymes [BR:
pgn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
PGN_1961
Prokaryotic defense system [BR:
pgn02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
PGN_1961
Subtype I-B factors
PGN_1961
Subtype I-C factors
PGN_1961
Subtype I-D factors
PGN_1961
Type II CRISPR-Cas system
Subtype II-B factors
PGN_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
PDDEXK_3
Tox-REase-9
Motif
Other DBs
NCBI-ProteinID:
BAG34479
UniProt:
B2RM84
LinkDB
All DBs
Position
complement(2190886..2191395)
Genome browser
AA seq
169 aa
AA seq
DB search
MIITGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGI
KIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVLGATGILEYPTLRKKEEVI
LSDIDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaccggcacgcacttcaactatcatcaggtttgtcggagaaagctatggctt
ttctctgcaggtattacgatggagcatacatctgatttagtgtacgaggggaaattgatc
catgagacaacgtaccagcaacgaccggagcgataccaagaattggagttggacggcatc
aagatagacttttacgatgcaaaaaacagagtggtacacgaggtcaaaaagtctaacaaa
atatcgcctgcccacagactccaactactctattacttatatgtattggagcgtaatggg
gtattgggagcaacggggatattggagtatccgactctacgaaaaaaggaagaagtgatt
ctttctgacatagatcgcgaacggatcagagagatcgagcaggagatcctacagattatc
agtcacgaggattgtcctcctgttatcgactccgggatctgtaaaaactgtagctattac
gaattctgcttctcgggagaagagcaatga
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integrated database retrieval system