Pseudobacter ginsenosidimutans: FSB84_00270
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Entry
FSB84_00270 CDS
T06126
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgo03016
]
FSB84_00270
Enzymes [BR:
pgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FSB84_00270
Transfer RNA biogenesis [BR:
pgo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FSB84_00270
Prokaryotic type
FSB84_00270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QEC40205
LinkDB
All DBs
Position
complement(57245..58147)
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AA seq
300 aa
AA seq
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MLAVTILGNNSALPAYDRHPTAQLVTLDDQLFLVDCGEGTQVQLSRYRIRWGRINYIFIS
HLHGDHYFGLPGFLNSMGLLHRENDLHLFAPPELEPILDLQFKAASTVLPYKLHFHPLTE
EGVLVKTDKFKVTCFPTKHRIPCWGFRFEQVKAPRRVNPEKAVRHGVPAAFYDKLKWGEN
YTTQSGNLVMNEMVTDPAAKPKSYAYCADTIYDEELIPRIEGVDMLYHETTYLRELNDRA
AARFHSTTEQAANIAKSANVGRLLIGHFSSKYENLDQFQAEAREVFPATDLAIEGVTFRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgttacgatccttggaaataattctgcattacccgcctacgaccgtcatccg
acggcccagttggttacattggatgaccagctattcctggtagactgtggagaaggcacg
caggtgcaactcagccgctaccggatccgctggggccgcatcaattatattttcatctca
catcttcatggcgaccattatttcgggctgccgggattccttaacagcatgggattactg
catcgcgagaatgatctgcacctctttgcgccgcctgagctggaacctatactggacctg
caattcaaggcagcgagcacagtgcttccctacaaattgcatttccatccgcttacggaa
gaaggtgtgctggtgaagacggataaatttaaagtcacctgcttcccaaccaagcaccgc
attccctgctggggcttccgtttcgaacaggtgaaagcgccgcgcagagtgaatcccgag
aaagccgtacggcatggcgtacccgctgcattctacgacaagcttaaatggggcgagaat
tataccacgcagagcggtaacctggtgatgaatgaaatggtaactgatcccgcagccaaa
ccaaaatcttacgcatactgcgccgatactatctatgatgaagagctgatcccccgcatc
gaaggagttgatatgctctatcatgaaactacctatctcagggagcttaacgatcgcgct
gccgcccgcttccattccactaccgaacaggctgccaacatcgcgaagagcgccaatgta
ggcaggttgcttatcggacatttcagttccaaatacgaaaacctcgatcagttccaggca
gaagcccgcgaagtttttcctgccacagacctcgctattgagggggttactttcagggga
tag
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