Pseudobacter ginsenosidimutans: FSB84_00920
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Entry
FSB84_00920 CDS
T06126
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo00521
Streptomycin biosynthesis
pgo00523
Polyketide sugar unit biosynthesis
pgo00541
Biosynthesis of various nucleotide sugars
pgo01100
Metabolic pathways
pgo01110
Biosynthesis of secondary metabolites
pgo01250
Biosynthesis of nucleotide sugars
Module
pgo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FSB84_00920 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FSB84_00920 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FSB84_00920 (rfbC)
Enzymes [BR:
pgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FSB84_00920 (rfbC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
DUF1501
Motif
Other DBs
NCBI-ProteinID:
QEC40321
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All DBs
Position
complement(222875..223432)
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AA seq
185 aa
AA seq
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MPFIETDFPGLIIFEPAVFEDNRGYFFESYNDKVFEQMEIGPFLQDNQSHSKYGVIRGLH
YQLAPHAQAKLVRVLSGTIQDIAVDIRKGSPTFGKVFSIELSAENKKQLYIPGGFAHGFS
VLSETADVLYKCDTFYNKEAEGGIIYNDPSLNIDWKIPADKVIVSPKDLLNSSFAECLNN
FEFHA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcattgaaacagattttccagggctgatcatttttgaacctgcggtgtttgaa
gacaatcgtggctattttttcgaatcctataacgacaaggtatttgaacaaatggagata
ggcccctttctgcaagacaatcaatcgcattccaaatatggtgtgatccgcggcctgcac
tatcagcttgctcctcatgcacaggccaaactggtgcgtgtactcagcggcactatccag
gatattgcagtggatatccgcaaaggctcacccactttcggcaaagtattctctattgaa
ctctctgccgaaaataaaaagcagctatacattcccggtggattcgctcatggtttttcc
gtgctcagtgaaacagcggatgtattgtataaatgcgataccttctacaacaaggaagca
gaaggaggaatcatttacaatgatccttcactgaatatcgactggaagataccggcagat
aaagtgattgtttcacccaaagacctgctgaattcttcctttgctgaatgcctcaataat
ttcgaattccacgcataa
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