Pseudobacter ginsenosidimutans: FSB84_00925
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Entry
FSB84_00925 CDS
T06126
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo00521
Streptomycin biosynthesis
pgo00523
Polyketide sugar unit biosynthesis
pgo00525
Acarbose and validamycin biosynthesis
pgo00541
Biosynthesis of various nucleotide sugars
pgo01100
Metabolic pathways
pgo01110
Biosynthesis of secondary metabolites
pgo01250
Biosynthesis of nucleotide sugars
Module
pgo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FSB84_00925 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FSB84_00925 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FSB84_00925 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FSB84_00925 (rfbB)
00525 Acarbose and validamycin biosynthesis
FSB84_00925 (rfbB)
Enzymes [BR:
pgo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FSB84_00925 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QEC40322
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All DBs
Position
complement(223473..224537)
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AA seq
354 aa
AA seq
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MANYSKKIMITGGAGFIGSHVVRLFVNKYPDYLIVNVDALTYAGNLENLRDVESKNNYVF
EKADILDEPAIAALFEKYDFDGVIHLAAESHVDRSIKDPLAFVRTNVLGTVNLLNASKAH
WKKTGMENKRFYHVSTDEVYGSLGETGFFTETTPYDPRSPYSASKASSDHFVSAYHHTYG
LPTVMSNCSNNYGSHHFPEKLIPLMINNIVNNKPLPVYGKGDNVRDWLYVNDHATAIDTI
FHNGKNGDSYNVGGFNEWKNIDIVHLLCSIMDKKLNRPAGESAKLITFVTDRPGHDHRYA
IDATKLNSELGWKPSLQFEEGLEKTVDWYLANQEWVKNITSGEYQHYYEEQYKK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggccaactattcaaaaaagatcatgatcaccggcggcgccggatttattggctcacat
gtggtgcgcctctttgtaaacaaatatcccgattacctcatcgtgaatgtggatgccctc
acttatgcaggcaacctggagaatcttcgcgatgtggaatccaaaaacaattatgttttt
gaaaaagcggatatcctggatgaacctgctattgcagccctttttgaaaaatatgatttc
gatggggtgatacatcttgctgcagaaagccatgtagacaggtccatcaaagacccgctg
gcctttgttcgcaccaatgtgctgggtacagtaaacctgctcaatgccagtaaggcgcac
tggaaaaaaacaggcatggaaaacaagcgcttctaccatgtatccacagacgaagtatac
ggatctctcggagaaacaggcttcttcacagaaaccactccctatgatccacgctcccca
tactccgcttccaaagcaagctcagaccatttcgtgagcgcatatcaccatacttacgga
ttgcccaccgtaatgagcaactgctccaacaactacggctcccatcacttccctgagaag
ctgataccgctcatgatcaataatatcgtgaacaataaaccattgccggtttatggaaag
ggagataatgtgcgagactggctctacgtgaatgatcatgccacggctatcgataccatt
ttccacaacggaaaaaatggcgacagctacaatgtaggcggattcaacgaatggaagaat
atcgatatcgttcacctgctctgcagcatcatggataagaaactgaaccgccccgcaggc
gaatcagccaaactgatcacttttgttacagaccgccccggacatgatcaccgttacgcg
attgatgccaccaaactcaattcggaactcggctggaaaccatccctccagtttgaggaa
ggactggagaaaacagttgactggtacctcgccaatcaggaatgggtaaagaatatcacc
tccggagaataccagcactattacgaagaacagtacaagaagtaa
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