KEGG   Pseudobacter ginsenosidimutans: FSB84_01180
Entry
FSB84_01180       CDS       T06126                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pgo  Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:pgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgo03400]
    FSB84_01180
Enzymes [BR:pgo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FSB84_01180
    5.6.2.6  RNA 3'-5' helicase
     FSB84_01180
DNA repair and recombination proteins [BR:pgo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FSB84_01180
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QEC40372
LinkDB
Position
289664..292171
AA seq 835 aa
MLLHSTIGYQVIRRWLDAKQFEPFPFQEEAWQHITQGNSGLVNAPTGFGKTYSVFIGALI
DFINRHPENYLTKSKNGLQLLWLTPLRALAKDIGRAMEEAIAELGMNWKVGIRNGDTDVN
ERQRQKRQMPEVLLITPESLHLLLAQKGYAEVFKNLRIIAADEWHELIGSKRGVQVELAI
SRIVHVQHQHYGTFCNVWGISATIGNMQEAQDVLLSPVQALSGKQGVQVKAHLKKEVRIE
SILPDEIENYPWAGHLGLKLVDKVLPILDQSKTTLIFINTRGMAERWYQTLLTAAPELAG
AIALHHGSIEQELRIWVEEALHTARLKAVVCTASLDLGVDFRPVETVIQVGSPKGVARFL
QRAGRSGHRPGEVSTIYFLPTHSLELVEVAALKSAIAENYIENRDPMLLCYDVLIQYLCT
LAISDGFRPDELYREVTSTFCYRDMTEDDFHSVLEFVTTGGSALQQYDEYKKVEIIDGIY
RITSRRIAMRHRMHIGTIVSESMLKVKFVHGGWIGMIEEWFISRLTPGEVFTLSGRNLEL
VGIKDMTVLVKKSNSTKSIVPSWQGGRMPLSANLGKKLREQFNSVFKMQPDGRMVLARAK
DIEMRVLQPLFKLQEDLSHVPRANELLIEHIETKDGYHLFVYPFEGRLVHEAMAAVLAYR
ISRIMPITFSFAMNDYGFELLSDQPIPVDDANVYELFSPENLLTDIQRSANSTEMAKRKF
RDIAVIGGLIFQGYPGEQKKARHLQASASLLFNVFSEYDRNNLLIRQAFQEVFDREMEEA
RLRNMLERIQQSNIIIRFPERLTPFCFPIKVDSLRESLTSEKLEDRVKRMQELGG
NT seq 2508 nt   +upstreamnt  +downstreamnt
ctgttgctacattccaccataggataccaggtgatccggcgctggctggatgccaaacaa
tttgagcccttccctttccaggaagaagcctggcagcatattacacaaggcaatagcggc
ctcgtgaatgcacctaccggtttcggaaaaacctattctgtgtttatcggcgcattgatc
gatttcatcaacaggcaccccgagaattatcttaccaaatcaaagaatggattgcagctg
ttgtggttaacaccattacgcgcgctggcaaaagatattggccgggcaatggaagaagcc
attgcagagctcggcatgaattggaaagtaggaatccgtaatggagacaccgatgtgaat
gaacggcagagacaaaaaagacagatgccggaagtattgctgatcacacctgaaagtctg
catctgttgctcgcgcaaaaaggatatgccgaagtttttaaaaatctccgcatcatcgcc
gcagacgaatggcatgaactgatcggcagcaagcgtggtgtgcaggttgagcttgccatt
tcacgcatcgtgcatgtacagcatcagcattacggcacattttgtaatgtatggggcatc
agcgctaccatcggtaatatgcaggaagcgcaggatgtattgctttcgcctgtgcaggcg
ctgagtggcaaacagggtgtgcaggtaaaagcgcatttgaaaaaagaagtgaggatcgaa
tccattcttcctgatgaaattgaaaattatccctgggccgggcatctcggcctgaagctg
gtggataaagtattgccgatcctcgatcaaagtaagaccacgcttatcttcatcaatacg
cgcggcatggccgagcgatggtaccagactttgctcacggctgctcctgaactggcggga
gccatcgctttacaccatggcagtattgagcaggagcttcgtatctgggtggaagaagca
ttgcatactgccaggctcaaggccgtggtctgcactgccagtctcgatctgggtgtcgat
ttccgtcctgttgaaaccgtgatccaggttggttctcccaaaggagttgcccgctttctg
cagagagcgggaagaagcggacaccgtccgggtgaagtcagcaccatttattttctgccc
acgcattcactggaactggtggaagtggcagctttgaaatcagccatcgcagagaattac
atcgagaaccgcgatcccatgttattgtgctatgatgtgctgatacaatacctctgcaca
ctggcgatctccgatggcttcaggcccgatgagttgtatagagaagtgacctccactttc
tgctaccgcgatatgacggaagatgattttcattctgttcttgaatttgtgaccaccggc
ggctcagcgcttcagcaatatgatgaatacaagaaagtagagatcatcgatggtatttac
cggatcaccagccgtcgcattgcgatgcgacaccggatgcatatcggtactattgtgagt
gaatccatgctcaaagtgaaattcgtacacggcggctggatcggtatgatcgaagaatgg
ttcatctccaggctcacgccgggggaagtattcacactgtctggccgaaacctggaactg
gtgggcatcaaagatatgacggtactggtgaagaaatcgaattccaccaaatccattgtt
cccagctggcagggaggccgcatgcctctatccgccaacctcggaaagaaacttcgtgaa
caattcaacagcgttttcaaaatgcagcccgatggcaggatggtgctggcccgcgccaag
gacatcgagatgcgtgtgctgcaaccgttgttcaagttgcaggaagatctgtcgcatgtg
ccacgcgccaatgaactgctgattgaacatatcgaaacgaaagatggctaccatcttttt
gtttatccctttgaaggcaggctggtgcatgaagcgatggcagctgtgctggcttatcgt
atcagtcgtattatgccgatcaccttttcttttgccatgaatgattatggctttgagttg
ctcagtgatcaacccattccagttgatgatgccaatgtgtatgagctgttcagtccggag
aatcttcttaccgatatccagcgcagcgccaattcaacggagatggccaaacgaaaattc
agggatattgccgtgatcggtggattgatctttcagggctatccaggtgaacaaaagaaa
gcaagacacctgcaggcatccgcgagcttactgttcaatgtgttctccgagtatgacagg
aataacctgctcatccggcaggccttccaggaagtgttcgacagagagatggaagaagcc
cgcttacgcaatatgctggaacggatacagcaaagcaatatcattatcaggttcccggaa
agattgacaccattctgtttcccgataaaagtggatagtttaagagaaagtttaacgtca
gaaaagctggaggacagagtgaagaggatgcaagagctgggaggatga

DBGET integrated database retrieval system