Pseudobacter ginsenosidimutans: FSB84_01790
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Entry
FSB84_01790 CDS
T06126
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_01790
Enzymes [BR:
pgo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FSB84_01790
DNA repair and recombination proteins [BR:
pgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FSB84_01790
Prokaryotic type
FSB84_01790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEC40489
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All DBs
Position
complement(459343..460650)
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AA seq
435 aa
AA seq
DB search
MKKLNIFWFRRDLRLDDNAGLYQALRQAEPVLPVFIFDTNILDQLDNKQDNRVAFIHAAL
QGLQEQLLAQGAALLVVHDTPLNAFAQLLKHYPVAAVYTNHDYELYAKDRDEAVRILLNE
HNIPLHTFKDQVIFEKNEVVKDDGKPYTVFTPYSKRWLATLNDFYQGSYPNRKYFHNFYQ
QEAMAIPSLRKIGFKESDQPYPATVLKKLLIQRYSEQRDIPSLQGTTRLGVHLRFGTVSI
RKVLQQTIPLSATFVNELIWRDFFQMILWHFPHVGQGKAFRPAYDLIRWRNNEMEFERWC
QGRTGYPIVDAGMRELNATGFMHNRVRMIVASFLCKHLLIDWRWGEAYFAEKLLDYEFAS
NNGNWQWAAGSGCDAAPYFRVFNPTLQAKKFDPELKYVRRWVPELDDFGYPEPIVDHEFA
RKRCLEAYSKALKRE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgaacattttctggtttcgccgagaccttcgtctcgatgataatgccggg
ctctatcaagccctcaggcaggctgaacctgtgttgcctgtatttatcttcgatacgaat
attctcgatcagctcgataataagcaagacaatagagtggcattcattcatgccgcattg
caaggcttgcaggagcagctgctggcacagggcgctgcattgctggttgttcacgatacg
ccgctgaatgcatttgcacagttgttgaagcattatcctgttgcagcagtatacaccaat
catgattatgaactgtacgcaaaagacagggatgaagcagttcggatcttactgaatgaa
cacaatattccgcttcatacattcaaagaccaggtgatctttgagaagaacgaagtagtg
aaagatgatggaaaaccttacacagtattcacgccctacagtaaacgatggctggctaca
ctgaacgatttttatcaagggtcttatcccaacagaaaatatttccacaacttttatcag
caggaagcaatggccattccttcattgaggaagatcggttttaaagaatcggaccaacca
tatcctgcaacagtgctgaagaagttactcatccagcgatacagtgaacagcgcgatatc
ccttcgttacagggcactactcgtttgggcgttcacctgcggttcggtaccgtgagcatt
cgcaaagtgttgcagcagacaattccattgagcgccacttttgtgaatgagctcatctgg
cgcgatttcttccagatgatcctctggcatttcccgcatgtaggacagggaaaagctttc
aggcctgcgtacgacctgatccgatggcgcaataatgaaatggaatttgaaagatggtgc
cagggaagaacgggttatcccattgttgatgcgggcatgcgtgagctcaatgctactggt
ttcatgcataatcgtgtgcgcatgatcgttgcatcattcctgtgcaagcatttgctgatc
gattggcgatggggcgaggcatattttgcggagaaattactggattacgaattcgcttcc
aacaatggcaactggcaatgggcggcaggaagcggttgcgatgctgcaccatatttccgc
gtattcaatcccacactgcaggcaaagaaatttgatccggaattgaagtatgtaagaaga
tgggtgccggagctggacgatttcggttatcccgaaccgatagtggatcatgagtttgca
agaaagcgctgcctggaagcatacagtaaagcgttgaaacgggaatga
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