Pseudobacter ginsenosidimutans: FSB84_03180
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Entry
FSB84_03180 CDS
T06126
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgo03009
]
FSB84_03180
Enzymes [BR:
pgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FSB84_03180
Ribosome biogenesis [BR:
pgo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FSB84_03180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
DUF6831
Motif
Other DBs
NCBI-ProteinID:
QEC45842
LinkDB
All DBs
Position
823791..824927
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AA seq
378 aa
AA seq
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MSRDAAGFEEKTKGFKKEIPAAPKDQEQQSPRFKNTRFTDRNPYQKNEEGSTEDTKPSRF
DKTEKPAFKKREGGSEKTSKPKSNFASRIEGAGPQTEKSAKNTPGTARKKIAVEKTEETP
EKPAIVNTGTMPLNKFIAHAGVCSRRDAADIVRSGKVVVNGETVTEPGFKVSGKDEIKVN
GKKIAVRRNLVYILLNKPKDYITTTEDPQGRKTVLDIIRNATTERVYPIGRLDRNTTGVL
LLTNDGELAQKLSHPSYEIKKIYEVTLDKPLTKKDFDSIIGGVNLEDGFIQPDALAYADS
KDKAVIGIEIHSGRNRIVRRIFEHMGYDVRNLDRVMYANLTKKNVDRGKWRLLTEKEVRL
LKYLNASYTNKNKPARRG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgacgctgcgggctttgaagaaaaaacaaagggcttcaaaaaagaaattccc
gctgcaccgaaagatcaggagcagcagtcgcccagattcaagaatacacgcttcaccgac
aggaacccttaccaaaagaacgaagaaggctccacagaagataccaaaccttcccgtttc
gataaaacagaaaagcctgcattcaaaaaacgtgaaggcggatccgaaaaaacatcgaaa
cccaaatcgaacttcgccagccggatcgaaggcgcaggcccgcaaacagagaagtctgca
aaaaacactcccggtaccgcccgcaagaagattgcggtagagaaaactgaggaaactcct
gaaaaacctgctatcgtgaatacaggcactatgccgctcaataaattcattgcacatgca
ggcgtttgctccagaagggatgcagccgatatcgtgagatcaggtaaggtagtagtgaat
ggagaaaccgttaccgaaccaggtttcaaagtatccggcaaagacgagatcaaagtgaat
ggaaagaaaatagccgtgagaaggaatctcgtgtacatcctgctcaacaaacccaaggat
tatatcactactacagaagatccgcagggccgcaaaacagtgctggatatcatccgcaat
gccactaccgagcgcgtatacccgatcggaaggctggaccgcaatacaaccggcgttctt
ctccttaccaatgatggagaactggcgcagaaattatcacatcccagttacgagatcaaa
aagatctatgaagtaacactcgataaaccactcaccaaaaaagacttcgacagtatcata
ggtggcgtgaacctcgaagatggcttcattcagcccgacgcactcgcgtatgctgacagc
aaagacaaagcagtgatcggtatcgagatccacagcggccgcaaccgcatcgtccgccgc
atctttgaacatatgggctacgatgtgcgtaacctggaccgcgtaatgtacgccaatctc
accaagaagaatgttgaccgcggcaaatggagactcctcaccgagaaggaagtccgactg
ctcaaatacctcaacgcttcctacaccaacaaaaacaaacctgcgcgccgtggctaa
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