Pseudobacter ginsenosidimutans: FSB84_06520
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Entry
FSB84_06520 CDS
T06126
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03030
DNA replication
pgo03410
Base excision repair
pgo03420
Nucleotide excision repair
pgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSB84_06520 (polA)
03410 Base excision repair
FSB84_06520 (polA)
03420 Nucleotide excision repair
FSB84_06520 (polA)
03440 Homologous recombination
FSB84_06520 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgo03032
]
FSB84_06520 (polA)
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_06520 (polA)
Enzymes [BR:
pgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSB84_06520 (polA)
DNA replication proteins [BR:
pgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FSB84_06520 (polA)
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FSB84_06520 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSB84_06520 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Transposase_20
RNase_H_2
HHH
Blo-t-5
Motif
Other DBs
NCBI-ProteinID:
QEC41365
LinkDB
All DBs
Position
1582489..1585332
Genome browser
AA seq
947 aa
AA seq
DB search
MRQKVFLLDALALVFRAYYALIRNPRITSKGRNTNAQFGFTNTLLDLLNNQKPTHMAVCF
DTSAPTERHTEFTEYKANRQDAPEDLKAALPDIKKIIRGFNIPVIEFDGYEADDVIGTLS
KQAAKAGYEVFMVTPDKDYGQLVDGNIKIYKPGYQGGDAEILGAKEVCEKWNIKEVHQVI
DILGLMGDAVDNIPGIPGVGEKTAAKLLAEYGTLENVLENADKIKGALGEKIRNGANSAI
LSKKLATIITDVPVEFHAEDFKVKEINKDLLAEIFSELEFKTIGKRILGESFNVIPGAAP
QGVQTDLFGNAVDTPAAKSKGKKEEEATDEDRAPSTETLHAGKTIHNTAHQYRAITEDAA
IDTLIKELMEQPEICFDTETTNLDANDAELVGMSFSYKTGEAYYVPCSPDQEQTKKLLKK
FAPLFDNTNIIWLGQNLKYDMLVLKWYGFELKGNIFDTMLAHYVIEPDGKRSMDVLSVQY
LGYEPIHIDELIGKKGKTQGNMRDVELSKITDYAAEDADVTLQLKQVFAPLLKTKEVEKV
FSEVENPLVKVLTDMEFEGVRIDVDFLKEYSSQLEQEAKQAEENVFQQAGVKFNLGSPKQ
LGEVLFEKLQLDPRAKKTKTGQYATGEDVLLKLAGQNKIVDDILAYRELTKLRSTYVDAL
PQMINRKTGRVHTSYAQAVAVTGRLSSNNPNLQNIPVRTDRGKEIRKAFIPRDNGHTLLS
ADYSQIELRIVAAISGDPAMCEAFKLGKDIHTATAAKVYGVDEADVTKEMRYKAKSVNFG
IIYGQGAFGLADNLGISRTEAKEIIDNYKKQFSNIQKYMDDTINFARETGYVQTLMGRKR
WLRDINSANFTVRGFAERNAINSPIQGTAADMIKLAMIKLHHEFKKNKFKSKMILQVHDE
LVFDAVLEEVDTIKPLILDCMSSALTLPNEVPVLAEIGGGKNWLEAH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaaaagtattccttctcgacgcactggcgcttgtatttcgtgcttactatgca
ttgatccgcaacccaaggatcacttccaaaggcaggaacaccaatgcacagttcggcttc
accaatacattactcgatctgctgaacaaccagaagccaacccatatggccgtttgcttc
gatacatcagctcccactgaaagacataccgaattcacagaatacaaagccaaccgccag
gatgcgccggaagacctcaaggctgctcttcccgatatcaaaaagatcatccgcggattc
aatattcccgtgattgaatttgatggttatgaagcagacgatgtgataggcaccctcagc
aaacaggcagccaaagcaggctatgaagtgttcatggtaacgccggacaaggattatggt
caactcgttgacggcaatatcaagatctacaaacccggctaccagggcggagatgcagag
atcctcggcgccaaagaggtttgcgaaaaatggaatatcaaagaagtgcatcaggtgatc
gatattctcgggctcatgggagacgcagtggacaatatccccggcatccctggtgttgga
gagaaaaccgccgccaaactgctggcagaatatggcactcttgagaacgtactcgaaaat
gcagacaagatcaaaggcgcactcggcgaaaaaatacgcaatggcgctaattcagccatc
ctctccaaaaaactggccaccatcattacagacgtgcccgttgaattccacgcagaagat
ttcaaagtaaaagagatcaacaaagatctgctggcagaaattttctcagagctcgaattc
aaaaccatcggtaaacgcattctcggcgaaagcttcaatgtaattcccggagccgctcca
cagggcgttcaaaccgatctcttcggcaatgccgttgatacgcctgcagctaaaagcaaa
gggaagaaagaagaagaagcaaccgatgaagaccgcgcacccagcacagaaacgctgcac
gccggcaagaccattcataacactgcacaccaataccgcgccatcacggaagacgccgcc
atcgataccctgatcaaagaactgatggagcaacccgagatctgcttcgataccgaaacc
accaatctagatgccaatgacgccgaactggtaggcatgagcttctcttacaaaacagga
gaagcctactacgttccctgctctcccgatcaggaacaaacgaaaaagctattgaagaaa
ttcgcgccgcttttcgacaataccaatatcatctggctcggtcagaacctcaaatatgac
atgctcgtactgaaatggtacggcttcgagctgaaaggaaatattttcgataccatgctt
gcccattacgtgatagaacccgatggcaaacgcagcatggacgtgctcagcgtgcaatac
ctcggctatgagcccattcatatcgatgaacttatcggcaagaaaggaaagacacagggc
aatatgcgtgatgtagaattgtcgaagatcacagactatgccgcagaagatgcagatgtg
accctgcaattgaaacaggtgtttgctcctttgctcaagaccaaagaagtagaaaaagta
ttcagtgaagtggagaacccgctcgtgaaagtacttaccgatatggagttcgaaggtgtt
cgcatcgatgtggacttcctcaaagaatattcatctcaacttgaacaggaagccaaacag
gccgaagagaacgtattccagcaggctggagtgaaattcaatctcggttctcccaaacag
ttaggagaagtgcttttcgagaaactgcaattggatcccagggccaaaaagaccaagacc
ggtcaatatgctaccggcgaagatgtgctgttgaaactggccggccagaataagatcgtt
gatgatatcctggcctaccgcgagctcaccaagttgcgctccacctacgtggacgctcta
ccacagatgatcaaccgcaaaacgggccgcgtgcacacatcgtatgcccaggctgttgca
gttactggtcggcttagcagcaataaccccaacctgcagaatattcccgttcgtacagac
cgtggcaaggagatccgcaaggctttcattccccgcgataatggccataccctcctctct
gccgactattcgcagatcgaactgcgcattgtggccgccatcagcggagacccggccatg
tgcgaagcgttcaagctcggcaaggatatccatactgccactgctgcaaaagtgtatggg
gtagacgaagcagatgtgaccaaggaaatgcgctacaaagccaagagcgtgaacttcggt
atcatttacggacagggagcattcggacttgcggataatctcggtatcagcagaactgaa
gccaaagagatcatcgataattacaagaagcaattctccaacatccagaaatacatggat
gataccatcaacttcgctcgtgaaaccggttacgttcaaaccttgatgggcaggaagcgc
tggcttcgcgatatcaattccgccaacttcacagtaagaggttttgctgaacgaaacgcc
atcaactcccctatccagggaaccgccgcagatatgatcaaactggcgatgatcaaactg
caccacgaattcaaaaagaataaattcaaatcgaagatgatcctgcaggtgcatgacgag
ttggtcttcgatgccgtactggaagaagtggataccatcaaaccgctgatcctggattgt
atgagctcagcacttacgttacccaatgaagtacctgtactcgcggagatcggaggtggc
aaaaactggctggaagcgcactaa
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