Pseudobacter ginsenosidimutans: FSB84_08270
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Entry
FSB84_08270 CDS
T06126
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
FSB84_08270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
DUF7130
HypA
Motif
Other DBs
NCBI-ProteinID:
QEC41686
LinkDB
All DBs
Position
complement(2009514..2015555)
Genome browser
AA seq
2013 aa
AA seq
DB search
MMKDPVGSFDIIKENFIRYVKTAFGTKFTGIENERYHLLNFDKVLYREPWIEPLPDYLSS
DKVIDDLTIGDLSNALTEQELFCFKELVKKGLFPADGKLYDHQTEMLRESLAGHNCIITS
GTGSGKTESFLLPLFAQLARELTSWSPSGVKGANTDNWWNQLTPRQIADPTNDYKLSTNA
QQRSHETRPAGIRALILYPMNALVEDQMSRLRKALDSDETRMWLNESAKGNSIYFGRYNG
DTPIPGELKVTKDDGSVGINLNKINELKDKLQFIERDATRVAQYIEENGITGNEAIELKS
FFQRLDGGEMRCRFDMQVSPPDIFITNYSMLSIMLMRDVDAGIFQQTKSWLACEDLPHAA
VEQEKKKRVFHLIIDELHLYRGTQGTEVAYLLKLVLDRIGLHPHHPQLRILASSASLEPG
KEESVKFLQDFFGVDNNVKPFKIVSGKNNPVNEITEAEQKLPLAPFISIADSYDRAGENV
NDEHFIAICEQSANELSLTLGIPASTEFGAHRLLQTLIHPSVQLRERLYSACKIDGIFRA
VCTIRAMGDTGEGIYFSESVFEQCLDQHMVRKALRGLLISRAMLDEPAYKHIETKHPLTK
LPRFRFHYFFRNIEGIWASVKANETENAFSDIQRTAGRLYPATRIKSDEGYRVLELLYCD
NCGTTFFGGSRLTGVNNSFELLPISPNIEGIPEKTPGKLVEKRSYQEFAVFWPQGQQEYV
PQDWPSGYWRQTTVGGIDQANFEAYWEPASLNVFSGDVYMSNEKAEQEPDQWVKGRLFVV
KDGTKNDIANIPALAGNMVETHRGLPCVCPACGINHQKRQNDHQKSKTSPVRGFRTGFAK
TTQIFAKELMYRLPAGEKERKLIVFSDSREDAAQIANGIERNHFIDLLREILVTELHSNL
LFRFQVIEALDANNESQKALLRAQNEEVYDDVEDLFDKSNYSEANTTKLREKADSITALN
QYRARIINARELVDITNSINLAPLIRRFAFLGINPGGQDLSIQSRLLNNQFVPWYDLIDF
PNFRWASGADSTYIADIKSGTFSNLANIFFRSLFYSFESSALGYITIDAKRQRIVDEASS
LGVSKEMFTQILSSCIRILGDKYKHNYSDDTDPFNFTDFTRLPSHLKKFIKRVAERNGID
ETALGDACFNTLSGIGVLRGDRGIIIEELFIKIATSNDPVWTSPRGNRPHLHFSGGICTY
SLTVLNNSNDKVCQNIWEQNYLSYNAIIEKRPPIRLHCEELTGQTDDQFTRQRHFRNIIL
PDEGYKKVKIIDLLSVTTTLEVGVDIGALQAVMLGNMPPQRFNYQQRVGRAGRRGQAYSV
ILTFCRGRSHDEYYFSNPQKITGDAPPTPFLTMGQPRIFRRLLSKEILRKAFLTIETNVN
NDEEKPSVHGDFGKIDNWPNYEIQLRAWVTNNRKKIESTVDTLITPILLINKSDFVDWIC
DLNSASGFIGKINTIVNNDEIATNDISEKLAEGGILPMFGMPTTVKNLYHGINERLGLLA
IDRPQAMAIYEFAPGSQKTKDKAIHTVIGFTSNFIKTRRAGVETVTNVATSNALPFSLNR
WMVRCKSCGFNQTYSEDNEPQSDACPNCGNQNTSTFAKFMIKTPRAYRTNLSLGSDVKDD
SELMISRPPVFAEKVEDPANPDANKLVDNAVLILSDKDVTWRINTNSDRFYYGKMFNTNN
RFPTGQTFSFNNQWILSDLANGFNNNGYSSYFSPLPNSQEQQIALANNKTTEIFRLSPLT
VPLELDLNMFAKDTDEMHVKAQSYGVRSAFYSAAFLIQRILADKLDIDPTEIEIADITLK
KVDDGTDRRTAEIVLTDELPNGSGFVRYLFDNFSSIVNDALSPANISSYTGKIHSQRHKD
NCSDACYECLKVYRNMNYHSLLDWRLGLGLLRLFTNSEYKCGTDQRFSPFTELNDWLIFI
QKAGNTFASSFDLGSCEELNGLPVLKWGARKRNVIMFVHPFWDLKNIRVDNWLAEIKMEI
DDYIRTSGGRLSIIDSFNLHRRPGWCYEKLIMK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagatccagtaggctcatttgacataatcaaggaaaacttcataagatatgta
aaaacagcttttggaacaaagttcacaggtattgaaaatgaaagatatcatctactgaat
ttcgataaagttttatatagggaaccttggatagaaccacttccagactatttatcgagt
gataaagtaatagatgacttaaccataggtgacctgtcaaatgccctgacagaacaagaa
ctgttttgttttaaagagttggtaaaaaaagggctattcccagctgatggtaaactatat
gaccaccaaacagaaatgttgcgagaatcattagcaggccataattgtattattacttcc
ggaacaggttcgggaaaaacagaatcgtttctccttcctttatttgctcaacttgctagg
gagttaacctcttggagcccttccggggtaaaaggtgccaatacagataattggtggaat
caattaactccaagacagatagcagaccccacaaatgattataagctttcgactaatgct
caacaaagaagccatgagacacggcctgccggaatacgtgcgttgatattatacccaatg
aatgctttggtagaagaccaaatgtcaaggctccgtaaggcactggactcggacgaaacc
agaatgtggctgaacgaatcagcaaaaggaaattctatttacttcggcagatataatggc
gacacaccaattcctggtgagttaaaagtcaccaaagatgatgggtctgttggaattaat
cttaataaaataaacgaactcaaagacaaacttcaatttatcgagagggatgccaccaga
gttgcgcagtatatcgaagaaaatggaattaccggtaatgaagcaattgaattgaaatca
ttttttcagcgtttggatggaggtgaaatgcgatgtcgttttgatatgcaagtttcgcca
ccagacatttttattactaattattcaatgttaagtattatgctaatgagggatgtagac
gctggcatctttcaacagacgaaatcatggctcgcatgcgaggatttaccacatgcagcc
gttgagcaggagaagaaaaaaagagtctttcatctcattatcgatgaattgcatttatac
cggggtactcaaggaactgaggttgcctacctactgaaactcgttctggacagaattggc
ttgcatccgcatcatcctcagcttaggatattggcgtcgagtgcttcattggagccaggg
aaagaagaaagtgtaaaatttttacaagatttttttggagttgacaacaatgtgaagcca
ttcaagattgtatctggcaagaacaatccggtgaatgaaattacagaagcagaacaaaaa
ttacctttggccccattcataagcatcgctgattcttatgatcgagctggagagaatgta
aatgatgagcatttcatagctatatgcgaacaaagtgcaaatgagttgtcactaacatta
ggaataccagcatcaaccgaattcggagcacaccggcttttacaaactcttattcatccg
tcagtccaattgagggagcgactttattcggcgtgtaagattgacggcattttcagagca
gtctgtacaatacgtgcaatgggagacactggagaaggaatatatttttcggagtcggtt
tttgaacagtgcctagaccaacatatggttcgaaaagctttaagaggtctattgatttca
agagcaatgttggatgaacctgcttataaacacatagaaaccaagcatccacttaccaaa
ttgccacgtttccgttttcattattttttcaggaacattgaaggtatttgggcttcggtc
aaagcaaatgaaaccgaaaacgcgttttcggatatccaaaggacggcgggtagattatac
ccagcaacaagaatcaaatcggacgaaggatatagggtgttggaacttttgtattgtgat
aattgcggaacaactttttttggtggaagcaggctgactggcgtaaataattcatttgaa
ctgttacctatcagccctaatattgaaggcatacctgaaaagacccctggcaaacttgtt
gagaaaagaagctatcaggaatttgctgttttttggccccaaggccaacaggaatatgtc
ccacaagactggcctagtggctattggcgacaaaccacggtcggtggaattgatcaagca
aatttcgaggcttattgggaacctgcttcattaaatgtcttttcaggtgatgtctatatg
agtaatgaaaaggctgaacaggaaccagatcaatgggtaaaaggaagattatttgttgtc
aaggatggtacaaaaaatgatattgcaaatattccggcacttgccggtaacatggtggaa
acgcaccgcgggttaccctgtgtttgccctgcttgcggaattaatcatcaaaagcggcaa
aacgatcatcaaaaatcaaaaacaagtcctgtcagaggatttaggacaggtttcgccaaa
acgacccaaatttttgcaaaggaactaatgtatcgtttgcccgctggtgaaaaagaaaga
aaattaattgtattttctgacagcagggaggacgcagctcaaatagcaaacggtatagaa
cgtaatcattttatagatttacttagagagattttagtaacagagttacattctaatctt
ttatttcgttttcaggttattgaagcactagatgctaataatgagtcccaaaaagcattg
ttgcgtgctcaaaatgaagaagtatatgatgacgttgaagatttgtttgacaaatcaaat
tattccgaagcaaatacaacgaagcttcgtgaaaaagcagattcgataaccgctctgaat
caatacagggcaaggatcattaatgccagggaacttgttgatattacaaactcaataaac
ctcgccccactaatacgacgttttgcttttttggggattaatcctggagggcaagacctt
tctatccaatcaaggcttcttaacaaccaatttgttccatggtatgatcttattgacttc
cccaattttagatgggcttcaggtgcagactccacatatattgccgacataaaaagtggc
acattttcaaaccttgcaaatatatttttccgctcattgttttactcatttgagtcatcg
gctttaggttatattactattgatgcaaaacgtcaaagaatcgtagatgaagcctcttca
ttaggagtttccaaagaaatgttcacacaaatcttaagttcctgtatcaggatattaggc
gataaatacaaacataattacagtgatgacaccgacccatttaatttcacagattttact
agactgccaagtcatctaaagaaatttatcaagcgcgtagctgagagaaacggaatagac
gaaactgctttaggtgatgcctgctttaatacattatcaggaatcggcgtgttgcgaggt
gaccggggaattattatcgaggaactctttattaagatcgctacatcaaatgacccagtt
tggacaagtccaaggggtaatcggccacacttacatttctctggtggtatatgtacttac
tcgttgactgtattgaataattcaaatgacaaagtatgtcaaaatatatgggaacaaaac
tatttatcttataatgcaataatcgaaaaacgaccacctatccgcttacattgtgaggag
ttgaccgggcaaacagatgaccaattcactaggcaaaggcattttcgaaatattatttta
cctgatgaaggatataagaaggtcaagatcattgacctgttaagcgtgaccacgaccctt
gaagtcggtgttgatattggtgctctgcaagctgtgatgcttggcaatatgcctccacag
aggtttaactatcagcaacgtgtcgggcgtgcaggaagaaggggccaagcatattccgtc
atcctgacgttttgccgaggccgtagtcatgacgagtactatttttcaaatcctcaaaag
attaccggagatgcgccgcctacaccatttcttactatgggacagccgcgaatattcaga
cgactgttgtcaaaggaaattcttagaaaagcatttttgacaattgaaacaaatgtgaat
aatgatgaggaaaagccgagcgttcacggagactttggcaaaattgataattggcccaat
tacgaaatacaattaagagcttgggtcactaataacaggaaaaaaatcgaaagtacagtt
gacactctcataaccccaatcctgttaatcaacaaaagtgattttgttgattggatatgt
gaccttaattcggcaagtggatttattggaaaaataaatactatagtaaataatgatgaa
atagccacaaatgacatttcggaaaagcttgctgaaggcggcatcctcccgatgttcggt
atgccaacaaccgttaagaatttatatcacggtataaatgaaagattggggcttcttgca
attgataggccgcaagctatggctatatatgagtttgcgccgggatcgcaaaaaacgaaa
gataaggccattcatacagtcattggcttcacaagcaactttatcaaaaccagaagagct
ggagttgaaacagtgacaaatgtggcaacttcaaacgcattgcctttctccttaaatcgg
tggatggtacgctgcaaatcatgtgggtttaatcagacttattcagaagataatgagcct
caaagtgatgcttgccctaattgtggcaaccaaaacacatcaacttttgccaaattcatg
attaaaactccaagggcctacagaactaacctttccctaggaagcgatgtcaaagacgat
tcagaattaatgatttccaggccaccagtctttgctgaaaaagtagaagatccagcaaat
ccggacgctaacaagttagtagataacgctgtcttaatcctttctgacaaggatgtcact
tggaggattaataccaattcggatcgtttctattatggtaaaatgttcaacaccaataac
agattccctactggccaaactttctcattcaataatcaatggatattgagcgacctagca
aatgggtttaacaataacggatactcaagttattttagcccgctacccaattcgcaggaa
cagcaaatcgccttggccaataataagaccactgaaatttttcgattgtccccgttaacc
gtaccactggaattggacctgaatatgtttgcaaaagacactgatgaaatgcatgtgaag
gctcagtcatacggtgtgagatcggctttttactctgcagcttttctgatacagcgcata
cttgctgacaaattggacattgacccgacagaaattgaaattgctgacatcaccttaaag
aaagtggatgacggtacagatagaagaaccgcagaaatcgttcttactgatgaattaccc
aacggctctggttttgttagatatctatttgacaactttagctcaattgtaaatgacgca
ctttcacctgcaaacatatcatcttacacaggaaaaatccattcacaaagacacaaggat
aattgtagtgatgcatgttacgaatgtttgaaggtttacaggaatatgaactatcacagt
ttgcttgattggagattaggactgggccttttacggttattcaccaattctgaatataaa
tgcggtacagaccaaagattttctccttttacggaattaaatgactggcttatttttatt
caaaaagcaggaaacacttttgcctcaagttttgacctaggatcgtgcgaagaactcaac
ggcttgccggtacttaaatggggggcaagaaaaagaaatgttataatgtttgttcaccct
ttctgggatcttaagaatataagggtggataactggttagctgaaataaaaatggaaatt
gacgactatataagaacatcaggagggcgattaagcattatagattccttcaacctgcac
aggcgaccagggtggtgttacgaaaaactcatcatgaaataa
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