Pseudobacter ginsenosidimutans: FSB84_08420
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Entry
FSB84_08420 CDS
T06126
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo00010
Glycolysis / Gluconeogenesis
pgo00020
Citrate cycle (TCA cycle)
pgo00260
Glycine, serine and threonine metabolism
pgo00280
Valine, leucine and isoleucine degradation
pgo00310
Lysine degradation
pgo00380
Tryptophan metabolism
pgo00620
Pyruvate metabolism
pgo00630
Glyoxylate and dicarboxylate metabolism
pgo00640
Propanoate metabolism
pgo00670
One carbon pool by folate
pgo00785
Lipoic acid metabolism
pgo01100
Metabolic pathways
pgo01110
Biosynthesis of secondary metabolites
pgo01120
Microbial metabolism in diverse environments
pgo01200
Carbon metabolism
pgo01210
2-Oxocarboxylic acid metabolism
pgo01240
Biosynthesis of cofactors
Module
pgo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pgo_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pgo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FSB84_08420 (lpdA)
00020 Citrate cycle (TCA cycle)
FSB84_08420 (lpdA)
00620 Pyruvate metabolism
FSB84_08420 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FSB84_08420 (lpdA)
00640 Propanoate metabolism
FSB84_08420 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FSB84_08420 (lpdA)
00280 Valine, leucine and isoleucine degradation
FSB84_08420 (lpdA)
00310 Lysine degradation
FSB84_08420 (lpdA)
00380 Tryptophan metabolism
FSB84_08420 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FSB84_08420 (lpdA)
00670 One carbon pool by folate
FSB84_08420 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgo04147
]
FSB84_08420 (lpdA)
Enzymes [BR:
pgo01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FSB84_08420 (lpdA)
Exosome [BR:
pgo04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FSB84_08420 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
GIDA
HI0933_like
DAO
Lys_Orn_oxgnase
AlaDh_PNT_C
FAD_binding_3
Thi4
3HCDH_N
TRAM_2
CetZ_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
QEC41715
LinkDB
All DBs
Position
2057714..2059117
Genome browser
AA seq
467 aa
AA seq
DB search
MATDFDLVVIGSGPGGYTAAIRASQLGFKTAIVEKYPVLGGTCTNVGCIPSKAMLDSSEN
FDIINHKVGKQGIEVSGAKVNFPQLTERNRNVVKQNNDGLNFLMRKNKIQVLTGVASFVD
NTKINITNGSEQPKSVTSKYFIIATGSKPSSIPGVNIDKERIITSTEALYLKEQPKEMVI
IGGGVIGVELASAYHRIGTKITIIEYADSLIPTMDKELGKELQKLLTKGGINVLVNSPVK
SAENTGSGVKVKFADANKNEQEINADYCLVAVGRRAYTTGLGLENTKVQVEKGLVVVNDQ
LQTAVENIYAIGDVVRGPMLAHKAEDEGVAVVDGIAGKPHKINYLRIPGVVYTWPEVAGV
GYTEEQLKAEGIEYRKGKFPFMASGRARASDDTDGFVKVLSDPKYGEVLGVHIIGARAAD
LIAQAVLAMEFELTDNELCKISYAHPTFSEALKDAYLISSGRGAINI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagattttgaccttgtggtaatcggatcaggccccggcggctatacagctgct
atcagggcctcacagcttggatttaaaacagcgatagttgaaaaatatcccgttctcgga
ggtacctgtaccaacgtggggtgtatcccttcgaaagcgatgctggacagctcggaaaat
tttgacatcatcaaccacaaagtaggtaagcagggcatagaggtgagcggtgcgaaagtc
aatttcccccagctcacagaaaggaacaggaatgtggtgaaacagaataacgacggcctg
aacttcctgatgagaaaaaacaagatccaggtactgacaggcgtggccagttttgttgac
aataccaaaatcaatatcaccaacggttcagaacaaccgaaatcggtgaccagcaaatac
ttcatcatcgccaccggttccaaaccatcttccatccccggcgtgaatatcgacaaagaa
cgaatcatcacatccactgaagcgctttacctgaaggaacagccgaaggaaatggtgatc
atcggcggaggagtaattggtgtggaactggcttcagcctatcatcgtattggcacaaag
atcaccatcatcgagtatgctgacagcctgatcccaacaatggacaaggaacttggcaag
gagttgcagaagctcctcacaaaaggcggcatcaatgtgctggtgaattctccggtgaaa
tccgcagagaacacaggttccggcgtgaaagtgaaatttgctgacgcgaacaagaacgaa
caggagatcaatgccgattattgcctggttgcagtaggccgccgcgcttacactacagga
ctgggactggagaacacgaaagtgcaggtagagaaaggactggtggtagtgaacgatcaa
ttgcagacagcagttgaaaatatctatgccattggcgatgtggtccgcggccccatgctg
gcgcacaaagcagaggacgaaggcgtggccgtagttgatggcattgccggaaaaccgcat
aagatcaattacctccgcattcctggtgtagtgtacacctggcctgaagttgcaggagtt
ggttacaccgaagaacaactgaaagctgaagggatcgagtaccgtaaaggaaaattcccc
ttcatggcaagcggccgtgcacgcgcatcagacgatactgatggatttgtaaaagtactc
agcgatcccaaatatggcgaagtattgggtgttcatatcattggcgcgagagctgctgac
ctgattgcgcaggctgtactggctatggagtttgaacttaccgataatgagctctgcaag
atctcttacgctcacccaactttctccgaagcgttgaaagatgcctacctgatctcatca
ggccgcggagcgatcaatatttaa
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