Pseudobacter ginsenosidimutans: FSB84_08705
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Entry
FSB84_08705 CDS
T06126
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo00061
Fatty acid biosynthesis
pgo00071
Fatty acid degradation
pgo01100
Metabolic pathways
pgo01212
Fatty acid metabolism
pgo02024
Quorum sensing
pgo04146
Peroxisome
Module
pgo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FSB84_08705
00071 Fatty acid degradation
FSB84_08705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FSB84_08705
09145 Cellular community - prokaryotes
02024 Quorum sensing
FSB84_08705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgo01004
]
FSB84_08705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgo04147
]
FSB84_08705
Enzymes [BR:
pgo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FSB84_08705
Lipid biosynthesis proteins [BR:
pgo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FSB84_08705
Exosome [BR:
pgo04147
]
Exosomal proteins
Exosomal proteins of breast milk
FSB84_08705
Exosomal proteins of breast cancer cells
FSB84_08705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF7486
DUF7465
Motif
Other DBs
NCBI-ProteinID:
QEC41768
LinkDB
All DBs
Position
complement(2119849..2121654)
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AA seq
601 aa
AA seq
DB search
MTEPRRLFDCLNYHLERKPIADMLSAKINGSWKSFSTREVKDIVDQLSAGLLSLGIGPGD
NTVEGKDKVALIAKNRPEWMMIDLAVQQIGAVLTPVYPTINVIDLEFILNDAKVKIIFVN
DEELYHKVAAIKDRVPTLQFIFTIEDVSGSRNWTELLSLSDSANLARVQKIADTIQYEDL
ATIIYTSGTTGTPKGVMLSHRNILSNVIACMPCFPPGDNMRSLSFLPLNHVFERMVTYLY
LFRGVAIYYAESMDTIADNLREVKPHMFTTVPRLLEKVYEKIMSKGADLTGVKRNLFFWA
HSLATKFEINKNQGMVYNMQLALANKLIFSKWREALGGQLRCIVTGGAAAQVRLIRIFTA
AGIPIMEGYGLTETSPVISVNRYEVQDRMFGTVGPLIDGVEVKIAEDGEILCKGPNIMMG
YYKRPDLTAESITDGWYHTGDIGQMINNKYLKITDRKKELFKTSGGKYVAPLPIENKLKE
SRFVEQVMVVGPERKFVGALIVPSFSNLKDWARKEGLEEMDNNKLIRHPKVIQLYKDLIE
NFNKFFNHVEQVKKFELLSNEWSINTGELTPKLSIKRKVIMEKYQDAIDRIYLNAVAHTE
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccagacgccttttcgattgcctgaattatcacctggaacgaaaaccaatt
gccgatatgctctcagcaaagatcaacggcagctggaaaagtttcagcacaagagaagtg
aaagatattgtggaccagctcagcgcaggcctgctttccctgggtatcggtcccggcgat
aatactgttgaaggcaaagacaaggtggcgctcatcgcaaagaacagacctgaatggatg
atgatcgacctggccgttcaacagatcggagctgtacttactcccgtttacccaaccatc
aacgttatagatctcgagttcattctcaacgacgccaaagtgaagatcatcttcgtgaat
gatgaagagctctatcataaagtggccgccataaaagacagggtgcctacacttcagttc
atcttcaccatcgaagatgtgagcggcagccgcaactggaccgaactgctcagtctttcc
gactccgccaacctggcccgtgttcaaaagatcgcagacactatccaatacgaagatctt
gctaccattatctatacttccgggacaaccggcactcccaaaggcgtgatgctctcgcac
aggaatatcctgagcaatgtgatcgcctgtatgccctgcttcccgcccggcgataatatg
cggtctttgagcttcctaccgctgaaccacgtgttcgagaggatggtcacttatctctac
ctcttccgtggcgtggcaatctactatgcggaaagcatggacaccatcgcagataacctg
cgcgaagtgaaacctcatatgttcaccaccgttccgaggctcctggaaaaagtctacgaa
aagatcatgtcaaaaggagcagatcttaccggcgttaaaagaaatctgttcttctgggcg
catagcctggctacaaaattcgagatcaacaagaaccagggcatggtgtacaatatgcag
ctggcactcgccaataaacttatcttcagcaaatggcgtgaagcgctgggcggacaactg
cgctgtatcgttaccggtggcgcggccgcacaggttcgactgatccgcatcttcaccgcc
gccggcattcctatcatggaaggatatggtcttacagaaacctctcctgtgatcagcgtg
aaccgctatgaagtgcaggatcgtatgttcggcaccgttggcccgcttatcgacggcgtg
gaagtgaagatcgcggaagacggagagatcctttgcaaaggccccaatatcatgatgggc
tattacaagcgccccgatctcaccgctgaatccatcaccgacggctggtaccataccggc
gatatcggacagatgataaacaacaaatacctcaagatcaccgaccgcaaaaaagaactt
ttcaaaaccagcggcggaaaatatgtagcgccgctgcccatcgaaaacaaactcaaagag
tccaggttcgtggaacaggtaatggtggtaggccccgaaagaaaattcgtaggagcgctc
atcgttccttctttctccaatcttaaggactgggcccgcaaggaaggcctggaagaaatg
gacaacaacaaactgatccgtcatcccaaagtgatacagttgtacaaagacctcatcgag
aatttcaataaattcttcaaccatgttgagcaggtgaaaaaatttgaactgctgtcgaac
gagtggagcatcaacaccggagaattaacgcccaagctcagcatcaaaagaaaagtgatc
atggaaaaataccaggatgctatcgatcgcatctatctcaatgcggtggcacatactgaa
gaataa
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