KEGG   Pseudobacter ginsenosidimutans: FSB84_10420
Entry
FSB84_10420       CDS       T06126                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo  Pseudobacter ginsenosidimutans
Pathway
pgo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FSB84_10420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgo03021]
    FSB84_10420
Transcription machinery [BR:pgo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FSB84_10420
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 GerE Sigma70_ECF HTH_40 HTH_23 HTH_24 HTH_5 HTH_11 HTH_10 MarR DUF2774 DUF722 TniQ HTH_Tnp_4 TnsD RPA_C HTH_Mga ACP_PD HTH_20 HTH_38 Phage_terminase Adenylsucc_synt HTH_7 DASH_Dam1 HTH_VMAP-M9 Fe_dep_repress HTH_28
Other DBs
NCBI-ProteinID: QEC42079
LinkDB
Position
2542264..2542968
AA seq 234 aa
MPFSFMILLISSTIPAFPPLINPLINSRQNNLPAGQTHNEKELLQLSAGGDESAFAQLFL
QNRHKLFSFLMRLTQSPEATEDVIQDIFMKLWRNRSSLTEIESFSSYLFRMAQNQCITHF
KRMAKETLILSRMASGASPSRSTTDEHLALKEVQEQLQQAVSKLTPQQKLVFTLSREKGL
KYEEIAAELNISASTVKNHMIDALRIIRQHFHSSSNALLIGGLYILLDTLQKIK
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcccttttcgtttatgatacttttgatttcaagtaccattcctgcctttcctccatta
attaaccccttaatcaattcccgtcaaaataatttgcctgccggtcaaacacataatgaa
aaggaactcctgcaactgtcggccggcggcgatgagtctgcctttgcacagctcttcctg
cagaacagacacaaattgttcagttttctgatgcggcttacacaatcacccgaggctacg
gaagatgtaattcaggacattttcatgaagctttggcggaaccggtcttccctaacggag
atcgaaagtttcagcagttacctattcaggatggcgcagaaccagtgcatcacgcatttc
aagagaatggccaaagagacgctgatattatcgcggatggcaagcggcgccagtccctcc
cgatccaccactgatgagcatctggcgcttaaagaagtgcaggagcagctacaacaggca
gtttccaaactcactccccagcaaaaactcgtattcaccctgagccgtgaaaaaggattg
aagtacgaggagatcgctgccgaattgaatatctccgcctcaacggtaaagaaccatatg
atcgatgcgctccgcatcatccgccagcattttcattcttcttccaatgctttgctaatc
ggcggattatatatactgctggatacccttcaaaaaataaaataa

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