Pseudobacter ginsenosidimutans: FSB84_10515
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Entry
FSB84_10515 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_10515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_10515
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_10515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_40
Xre-like-HTH
CENP-B_N
HTH_24
DUF134
PF0610-like_N
PhyR_sigma2
HTH_28
HTH_38
HTH_11
HTH_Tnp_ISL3
TnsD
HTH_10
HTH_20
RPA_C
Dimerisation2-like_dom
HTH_IclR
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QEC42098
LinkDB
All DBs
Position
2566092..2566724
Genome browser
AA seq
210 aa
AA seq
DB search
MKYFTTYQCLFSHLNTYDLHSDKELFSQIAEGDESAFATVFHKYNIQLFPGVLKVLKSQA
EAEEIVQNTFLKLWLNRLQLPEIENPGAWLFRIASNLALNALRDKATYRHYTAAAGNSSP
EGEPDALNEISTKELKSIIAEAVELMPTARQEVFRLSRYEGLSRQEIAQKLGIAESTVKN
QLTSSLKFIQEFIGKKYGIHLPVIIFLLFK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ataaaatattttaccacttatcagtgtttatttagccatttgaatacctacgatcttcat
agtgataaagaactgttctcgcagatcgcagaaggcgatgaatctgcctttgctactgtt
tttcacaaatacaatattcaattattccctggtgtattgaaagtgctcaagtcccaggct
gaggcagaagaaattgtacaaaacactttcctgaaattatggttgaacaggctgcaacta
ccggaaatagaaaatccgggagcctggctttttcgcattgcgtccaatctggcgctgaat
gcattgagagataaagccacttatcgccattatactgctgctgccgggaattccagcccg
gaaggagagcctgatgcattgaatgagatctccacaaaagagctgaagtcaattattgca
gaggcggtagaactaatgcccactgcacgtcaggaagtattccggctgagccggtatgaa
gggttgagtcgccaggagattgcgcagaaactgggcattgctgaaagtactgtcaagaat
caactgacatcctcattgaaattcatacaggaattcatcggtaagaaatacggtatccac
ctgcctgtaattatttttcttcttttcaaataa
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