Pseudobacter ginsenosidimutans: FSB84_10550
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Entry
FSB84_10550 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_10550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_10550
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
AAA_21
AAA_27
AAA_23
ABC_tran
AAA_16
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
QEC42105
LinkDB
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Position
2577249..2578541
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AA seq
430 aa
AA seq
DB search
MFLITDDQTIEDLRLFSKRERNGIYDIYNNTSTRGGELLLENMFRNPLANLDAIAKRAGA
IKAFAELQTAFPFSSAILDCVEKYINQGEENQDGQKSTFGDKEIGQGVTALIELLHAVKS
FLETGAIAQVKMLKEERRQVLQLLQGTGLEPVFKERPGNKLSFGALTAFDILLRTKEREK
TTAVLNFIYLIDVYVSVAQVSGKRNFVFPVPHPRGSNILKVEGVYHPELKNPVANNLHMH
PGKSLVFLTGANMAGKSTFLRAFSTAVYIAHMGFPVAAKRLEFSVMDGILTTINLPDNLG
IGASHFYAEVLRVKKVAAELGAGRSLFVLFDELFRGTNVKDAHEGTVAVTLAFAGKKNSL
FLISSHIVEAGDELKKKQNIGFHYLPTRMKGTVPEYTYTLEEGITDDRHGMIIIRNEGIL
ESLATGKKKG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgataacggatgatcaaactattgaagatctgaggctcttttccaaaagagag
cgaaatggtatttacgatatttacaacaatacatcaacgcgcggcggagaactcctgctt
gagaatatgttcagaaatccgctggccaacctggatgctattgccaaaagagccggcgcc
atcaaggcttttgccgaactgcagacagctttcccattttcatctgctatcctggattgc
gtggagaaatatatcaatcagggagaagaaaaccaggatggacaaaaatccacttttggt
gacaaggagatcggacaaggcgttacagctttaattgaactgctgcatgcagttaaatct
ttcctggaaacgggcgccattgcccaggtaaagatgctgaaagaagaaaggcggcaagtg
ttgcaattgttacagggaacaggtctggagccggtctttaaggaaaggcccggtaataag
ctgagtttcggagcacttactgcattcgatattttgcttcgcacaaaagagcgggagaaa
acaactgctgtattgaatttcatttacctgatagatgtatatgtatctgtggcgcaggtg
tcgggaaaaaggaattttgttttcccggtaccacatccccggggcagcaatatcctgaaa
gtggaaggagtgtatcatcctgagttgaagaacccggttgccaacaacctgcatatgcat
ccaggaaaatcactagtattcctgaccggggccaatatggcggggaaatcaacttttctt
cgtgcattcagcactgctgtttacatcgcgcatatgggatttccggttgcagcaaagcgg
ctcgaattctcagtaatggatggcatactcactaccatcaatcttcctgataatctcgga
atcggagccagtcatttctatgcagaagtattgcgtgtaaagaaagtagcagcagaactg
ggagcaggcagatcgcttttcgtactcttcgatgaattgttcaggggaaccaatgtgaaa
gatgcgcatgaaggcacagtggcggtaacgttagcatttgccggtaaaaagaacagtctt
ttcctcatatcctcgcatatcgtggaggcaggcgatgagctgaagaaaaaacagaatatc
ggcttccattatttgcccaccaggatgaaaggtacagttcccgaatatacctatacgcta
gaggagggtattaccgatgacaggcatggtatgatcattattcgcaatgaaggtatcctg
gaatcacttgctacaggaaagaagaaaggataa
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