Pseudobacter ginsenosidimutans: FSB84_12250
Help
Entry
FSB84_12250 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_12250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_12250
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
APS_kinase
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QEC42425
LinkDB
All DBs
Position
3017840..3019177
Genome browser
AA seq
445 aa
AA seq
DB search
MRLQTDEQTIEDLRIFSKKDSPGIYDIYNQTHTRGGEAALQEMFRHPLGSRELINKRSSV
IEQFAGSGARFPYSASLFDMAEKYLAHAGEQETRSPNGAAFGEKEIHNGVGAVIELIRGT
HSFLFSKELGTVKDYSDEKGEILMLLTDPAFEPALKDHSKGKLSYATVTAFDTLFRVREY
AKIKKLLGYIFRLDVYLSVAEVANKRNFVFPKAHEKGNYELEITGLYHPELKNPVSNDIS
LNAVSPVLFLTGANMAGKSTFLRSLSTAVYIAHMGFPVAARSMQFPVMDGIYTTINLPDN
LGIGASHFYAEVLRVKKMAEELHSGKCLFIIFDELFRGTNVKDAHEATVTVTNGFSQKRN
SLFVISSHIVEAGEQLMQNPKIGVRYLPTRMNGHTPEYTYKLENGITEDRHGMIIINNEG
ILEILKNGMKKKAKHVLSNTKHSLA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttcaaacagacgaacaaaccatcgaagatctcaggatcttcagcaagaaagat
agtccgggcatttatgatatttacaatcaaacccatacccgtggcggagaggcagcattg
caggaaatgttccgtcatccgttgggaagcagggagctcatcaataaacgcagttcagtg
attgagcagtttgccggatcgggcgcccgctttccctacagcgcttccttattcgatatg
gcggagaaatacctggcacatgcaggtgaacaggaaacgcgatctccgaatggagcagca
ttcggagaaaaggaaattcataacggcgtaggagcagtgattgagctgatcaggggcacc
cattcttttctcttttcaaaagagctggggacagtgaaggattattcagatgagaaggga
gaaatattgatgctgctgactgatcctgcttttgaaccggcactgaaggatcattccaaa
gggaagttgtcttacgcgactgtaaccgctttcgatactttgttcagggtgcgggagtat
gcgaagatcaaaaaactgctgggttatattttccgtctcgatgtatacctctcagttgcg
gaggtggccaataaaagaaatttcgttttcccgaaagcacatgaaaaagggaattatgaa
ctggagataaccggcctctatcaccctgaattgaaaaacccggtaagcaatgatatcagt
ttgaatgcagtttctcctgtgttgtttttgaccggggcgaatatggcggggaaatccaca
ttcctcagatcactgagtacggctgtgtatatcgcgcatatgggattccccgtggcggca
aggtcgatgcaattcccggtaatggatgggatttacaccacaatcaatcttccggataac
ctgggcattggcgcgagccatttttacgcggaggttttgcgtgtaaagaagatggcggag
gagctgcattccggaaagtgtttgttcatcatattcgatgagctgttccggggcaccaat
gtgaaagatgcacatgaggctacagtgaccgttaccaacggtttttcgcaaaaaagaaac
agtttgttcgtgatctcttctcatattgtagaggccggtgagcaactgatgcagaatccg
aagatcggggtccggtacctgccaacacgcatgaacggccatacacccgaatacacctac
aaactggaaaatggaataacagaagacaggcatggcatgatcatcatcaacaatgaggga
atcctggaaatattgaaaaatggaatgaaaaagaaagcgaagcacgttctttcaaacact
aaacattcactggcatga
DBGET
integrated database retrieval system