Pseudobacter ginsenosidimutans: FSB84_12310
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Entry
FSB84_12310 CDS
T06126
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_12310
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_12310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
DUF3135
HTH_23
UPF0122
HTH_Mga
TnsD
CSTF_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QEC42437
LinkDB
All DBs
Position
3036403..3037002
Genome browser
AA seq
199 aa
AA seq
DB search
MRVAQAIPQNQVKADELAQFDTVYHQFHQAVYANICKLVCEPQMAEDILQEVFISLWENR
QTVNLQDAGGWLFVVSYNKSMTFLKKKLRETSVILPDTEYLAAISEEQPVDEELFQLRLS
MVEEAIDHLPPRKREVFRLCRYDGKSYDEVADMLNISVVSVKDYLKQSTQFIRQYISRHY
NNIEIPGMYLLLIYFSQQG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagcgcaggcaataccgcaaaaccaggttaaggcagatgaactggcacagttt
gatactgtgtatcaccagttccatcaggcagtgtacgccaatatctgcaaactggtttgt
gagccccaaatggcggaagacatcctccaggaagtttttatcagcctttgggagaaccga
caaacagtcaacctgcaggatgcaggcggatggctgtttgtagtgagctacaataaatcc
atgaccttcctcaaaaagaaacttcgcgaaacctccgttatacttcccgatacagaatac
ctcgctgccatttcagaagaacaaccggtagacgaagaattgttccagctccgcctctcc
atggtggaagaagccatcgatcatttgcctccaagaaaacgagaagtattcaggctttgc
cgttatgatggcaaatcgtatgatgaagtggccgatatgctgaacatatctgtggtatcc
gtgaaagactatttgaaacaatccactcaattcatcagacagtatatcagccgccactac
aacaatatcgagatccccggcatgtacctgctcctcatctatttcagccagcagggttga
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