Pseudobacter ginsenosidimutans: FSB84_12935
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Entry
FSB84_12935 CDS
T06126
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgo02000
]
FSB84_12935
Transporters [BR:
pgo02000
]
Other transporters
Pores ion channels [TC:
1
]
FSB84_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
QEC42553
LinkDB
All DBs
Position
3183129..3186191
Genome browser
AA seq
1020 aa
AA seq
DB search
MIKSRLLPEAFICFLMAMLFAGTALAQTRTVTGKVTDNKSSPVVGATVQVKGGAGVSTNE
AGEFRINLSSAADSLIFSHVEFETRAVAVRNRSTFNISLQPKDMGLDAVVVVGYGTQKRR
DVTGAIGSVKGDAIRNMPVTDVAAALQGRVAGVEVVKSSGEPGAPTQITIRGVASLSQPQ
PLYIVDGVRQDGNNINMADVASFDVLKDASAASIYGAAAAGGVIIVTTKKGTGAKPTVNF
NARYGVTTPRMMELLRRDEFIRFRKLINDPVYGPQSQTDTLPDTDWAGALFDNGTEENYN
LSISGSSPNTNYFVSGIYNNQKGVFRKNSSGMYGFRLNTDIRVTDNIKIGEQLYVWQRNT
TPPTGVSINPPFRTIPTMGIYGNSPENPWAKSPPGFAGPNLVAQIETAHRQFTQANFQGN
AYAEIKLPFYLTFKTTLGYTYYNEELNYYQEAYNAGPVSVNATSLAKNNASTRSIFTNYV
LSFDHAFGEHSINALAGYEQISGITNGAQIGATSVGGTSYAFLLTSDSRINLANGGYDDN
ALIKSMFGRVSYDFAKKYFATFSIRRDGNFQKFGPNNRYGVFPAGSVGWRISDEPFMKQL
LPQANLLKLRGSYGVLGNSNIPSYVFLSTFDLVSAQNFAPGVVPVLNYTQQNIPNPNIKW
ESMYEANIGLDAEFMNGKLYASVDWYDKTTKDMLYNLPIPTSAGMPVSIFITNIGSVRNR
GIEFSAGYRSNIGEFSYNVGVTGAFNKNKVLNLDNINNNAILAGDNNYGSPSFGIWTGQQ
LASTKAGAPFGQFWGYKVIGMYQSDDEWKNHPQQEGKQAKKGDLIFADIDDNKKIDEKDR
TVIGSPYPDFVYGITLNLAYKGFDIQALFSGVAGVDIFNGVAPYAMSPFADGNTTNKVFG
ASMLDGDYLTSQPRIGEKTQTGFIQDPNHNYTWANSYFVENGSYLKLKQLQIGYNLPANI
LQKVKMKNARLYVMGYNLFCLTKYNGIDPELGGAVTTRGIDVPYRYPNSRIYSLGLDITF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatcacgattgctgcctgaagcatttatctgctttttgatggccatgctattt
gcaggaactgcccttgcgcagacccggactgtaacaggaaaagtaacagacaacaaaagc
agtccggtggttggagccaccgttcaggtgaagggaggcgccggtgtaagcaccaatgaa
gccggtgagttccgcatcaatctttcttctgcagcagattcccttatcttctcacacgta
gaatttgaaacccgcgctgttgccgttcgcaacaggtcaaccttcaacatttcattgcaa
cctaaagacatggggctggatgccgtggtggtagtgggttatggtacccagaaacgccgc
gatgttaccggggctatcggttccgtgaaaggtgatgcgatcaggaatatgccggtgacc
gatgttgctgccgctctccagggccgcgtggctggtgtggaagtagtgaaatcttccggt
gagcccggtgcccccacacagatcactatccgcggtgtggcttctctcagtcagccacaa
ccgctttatatcgttgatggcgtacgccaggatggtaataatatcaatatggcggatgtt
gccagcttcgatgtattgaaagatgcgagcgccgcctctatatatggtgcggcagctgcg
ggcggtgtgatcatcgttaccactaaaaaaggaacaggggccaagcccaccgtgaatttc
aatgcgcgttacggtgttactacgccacgtatgatggaactcctgcgtcgcgatgaattc
atccgctttcgcaaactgatcaacgatccggtgtatggtccgcaaagtcagacagacacc
cttcccgataccgactgggcaggcgccctcttcgataacggaacagaagagaactacaac
ctctccatttccggatcatctcccaataccaattatttcgtatccggtatttataataat
cagaaaggtgtattcagaaagaattcatccggtatgtacggtttccgtttgaatacggat
atcagggttaccgataatatcaaaattggtgagcagctctatgtttggcaaagaaatacc
acgccaccaacaggagtaagtatcaatccgccattccgcaccattcctacaatgggcatc
tacggtaattctccggagaacccctgggccaaatcgcctcccggatttgcaggacctaac
ctggttgcgcagatcgagactgctcacaggcagttcacccaggccaatttccagggtaat
gcttatgcggagatcaaactgccgttctaccttactttcaaaacaacactgggttatacc
tattataatgaggagctgaactattaccaggaggcttacaatgccggtccggtttcagtg
aatgccaccagtctggcgaagaacaatgccagcaccaggagcatcttcaccaactatgta
ctgagctttgatcatgcatttggcgaacactccatcaatgcgcttgccggttacgaacag
atcagcggcatcaccaacggtgcacagatcggtgccacttcagtaggaggtacttcttat
gctttcctgctgacttccgattcacgcatcaacctggccaatggcggttatgatgataat
gcgctgatcaaatccatgttcggccgcgtgagctacgacttcgccaaaaaatacttcgca
accttctctatccgccgcgatggtaatttccagaagttcggtcccaataatcgttacggt
gtgttccccgcaggttctgtgggctggcgtatcagcgatgagcctttcatgaagcaatta
ctgccgcaggccaatctgctgaaattgcgtggtagctatggcgtactcggtaacagcaat
attccatcttatgtgttcctctccacattcgacctggtgagcgcacagaattttgcgccc
ggtgttgtgcccgtgctcaattacacacaacagaatatccctaacccgaatatcaagtgg
gaaagcatgtatgaggccaatatcggtctggatgcagaattcatgaatggcaaactgtat
gcaagtgttgactggtacgataaaacgaccaaagacatgctgtacaacctgcccattcct
acaagcgccggtatgcccgtgagcatcttcatcaccaatatcgggtctgtgcgcaacagg
ggtattgaattctcagccggatatcgcagcaatattggagagttctcttacaatgttggc
gtaacaggcgctttcaacaagaacaaagtactgaatctcgataatatcaataacaacgcc
atccttgccggcgataacaactatggttctccgagcttcggaatctggactggtcagcaa
ctcgcttcaaccaaagccggtgccccattcggacaattctggggatacaaagtgattggc
atgtatcaatctgatgatgaatggaagaaccatccgcagcaggaaggaaagcaggcgaaa
aaaggcgatctcatttttgctgatatcgacgataataaaaagatagatgaaaaagacagg
accgttatcggcagcccataccctgatttcgtatatggtatcacgttaaacctcgcttac
aaaggattcgatattcaggcgctgttcagtggtgtggctggggtagacatcttcaacggt
gtagctccgtacgcgatgagcccgtttgcagacggtaacactaccaacaaagtgttcggc
gcttccatgctggacggggattacctgacctcacagccacgtataggtgaaaaaacgcaa
actggtttcattcaggatcccaaccataactatacatgggccaatagctatttcgtggag
aacggcagctatctcaagctgaaacaattacagatcggctacaacctgcctgccaatatc
ctgcagaaggtgaaaatgaaaaatgcccgtttgtatgtgatgggatacaacctgttctgt
cttaccaaatacaatggtatcgatcctgaacttggtggtgctgtaactacaaggggaatc
gatgttccttacaggtatccgaattcaaggatctattcactgggactcgacatcaccttc
taa
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