Pseudobacter ginsenosidimutans: FSB84_14215
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Entry
FSB84_14215 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_14215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_14215
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_14215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QEC42787
LinkDB
All DBs
Position
complement(3488804..3489451)
Genome browser
AA seq
215 aa
AA seq
DB search
MKEQFPGHSGYAYQQEPTTSNETITDPYRPAPAADQDQAMVEELRSGNSQAMISFFNLYY
APLCYFAERMIHDRQAAEDIVEDTFMKLWKKHTDFASIQNIKAFLYITTRNACLNLLKQY
QRDAVSRRELAYLNGDSDDFVLNTIIRTEVMAEIYRQIEKLPTQSRKVLKMSVFDNMRNH
EIAAALDVSIHTVKNQKVRAMQLLRMNICRNHSGA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacaattccccggtcattccggctacgcgtatcaacaggagccaaccaccagt
aatgaaaccatcacagatccgtaccggcccgcacctgccgctgaccaggaccaggccatg
gtagaagagttgagaagcggcaactcacaggctatgatctctttcttcaatctgtactat
gccccgctctgttatttcgcagagcggatgatacacgacaggcaggctgctgaagacatt
gtggaagacacattcatgaagctctggaaaaaacatactgatttcgccagcattcagaac
atcaaggcatttctctacatcaccacgcgcaatgcctgcctgaacctcctcaagcaatac
cagcgcgatgcagtttcgagaagggagctggcttatctgaatggcgacagtgatgatttt
gttctgaacaccatcatccgcacggaagtgatggcggagatctaccggcagatagagaaa
ttacctacacaatccagaaaggttttgaagatgagtgtgttcgacaatatgcgcaaccac
gagatcgctgcggcgctggatgtgagcatccatacggtgaagaaccagaaagtgagagcg
atgcaattgttgaggatgaatatctgccgcaatcactccggcgcataa
DBGET
integrated database retrieval system
