Pseudobacter ginsenosidimutans: FSB84_15210
Help
Entry
FSB84_15210 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_15210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_15210
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_15210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
FdhD-NarQ
AAA_14
ABC_ATPase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEC42972
LinkDB
All DBs
Position
3772920..3774254
Genome browser
AA seq
444 aa
AA seq
DB search
MAFSIDKQTIDELNLLGKFRTDSVYHLFNRVKTRGGEQLLDNMFRSPLTDAAAINARSET
FRNFQELALSFPFDVQQVNQMREYLDVRGSSNAVMVMAGTFIRKLLSGLTRDERFKKNVQ
GLQATIVTLNKCYALTESMRLASGAYENRVQAIKTILQNKKLETLRNTDIYQSLSVQTIG
YYNHLLQNQFAAELEAVLQFIYEVDLYIAVSDVAKAKGFNYATALASEDNKFWVEDLRHP
CIDKAVGNTVLMNGERNVIFLTGANMAGKSTLMKSIGIGMYLAHMGFPVAASRMEFSIRD
GLYSSINVADNIGLGYSHFYAEVMRVKQAAIAAASGKRLLLMFDELFKGTNVKDAYDGTL
AVTEGFADYRACLFIVSTHIIEVGEALQQRKNIHSVFMPTIMEGSKPRYTYKLEEGVTED
RQGMMIIRNEGILELISYQGHIIV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagtatagacaaacaaacgatcgatgaactgaacctgttggggaaattccgt
acagactccgtataccatttgttcaaccgggtgaaaacccgtgggggagagcagttgctg
gataatatgttccgctcaccactcaccgatgctgctgccatcaatgctcgcagtgaaaca
ttccgcaatttccaggagctggccctgagttttcctttcgatgtgcagcaggtgaaccag
atgcgtgaatacctagatgttcgtggcagcagcaatgctgtgatggtaatggcaggtact
ttcattagaaaattgctgtccggcctcaccagggatgaacgtttcaagaaaaatgtacag
ggattgcaggctacaatcgttaccctcaacaaatgctatgcgctgacagagagcatgcgc
ctcgcttccggagcctatgagaaccgggtgcaagccatcaaaaccatcctgcagaacaaa
aagctggaaacactcaggaatactgatatctaccagtccttatctgtgcaaaccatcggt
tattacaatcacctgctgcaaaatcagtttgctgcagagctggaagcggtgttgcagttc
atctatgaagtagatctgtatattgctgtaagtgatgtggccaaggcaaaaggattcaat
tatgcaaccgcgttagcgtcagaagacaataagttttgggtggaggatctgcgtcaccca
tgcattgataaagctgtagggaacacagttctgatgaacggggaaaggaatgtgatcttt
cttaccggggcgaatatggctggtaaatccacgctgatgaaatccatagggatcggtatg
taccttgcgcatatgggctttcctgtagctgcgtcccgcatggagttctcaatccgtgat
ggtttgtattcgagtatcaacgtggcagataatatcggacttggctacagccatttctat
gcagaagtgatgcgcgtaaagcaggctgctattgctgctgccagtggcaaaagactatta
ctgatgtttgatgagctcttcaagggaacaaatgtgaaagatgcgtatgatggcaccctc
gcggtgactgaaggatttgcggattaccgggcctgcctgttcattgtgagcacacatatc
attgaagtgggggaggcattgcaacaacggaaaaatattcattcggtatttatgccaacg
atcatggaaggaagtaaacccaggtacacctataaattggaagaaggtgttacggaagac
cggcagggtatgatgattatccgcaatgaaggtattctcgaactgatctcctaccagggt
catatcatcgtataa
DBGET
integrated database retrieval system
