Pseudobacter ginsenosidimutans: FSB84_15715
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Entry
FSB84_15715 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_15715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_15715
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_15715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_Mga
GerE
DUF6362
HTH_24
DUF8612
HTH_10
HTH_11
HU-CCDC81_euk_2
HTH_7
HTH_AsnC-type
HTH_23
DUF722
HTH_28
Sigma70_r3
INA17_N
Motif
Other DBs
NCBI-ProteinID:
QEC43067
LinkDB
All DBs
Position
complement(3907009..3907593)
Genome browser
AA seq
194 aa
AA seq
DB search
MLAPHSHNEADLLLRVAEGDQKAFAALFHAYHHRLGIYLYQLTSSRTFAEENIQDIFCKV
WEKRAQLPEVQNFQHWLFTVSKNHALNVLRKMVRERTEQLNWEKQQLNLSPDAELTTEDR
LQLIHKAISQLPPQQKKVFILSRYQRLKYVEIAKELNLSRETVKSYLQIATSSIRKYVNT
HLPLFIFLFSRFFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcaccacattctcataatgaagccgacctgttattgcgggtagctgaaggcgac
cagaaagctttcgccgccttgttccatgcttaccatcaccggcttggtatctatctttat
cagctcacttcctcaagaactttcgccgaagagaatatccaggatatattctgcaaagta
tgggaaaaacgtgcccagcttcctgaagtgcagaatttccagcattggctttttactgtt
tccaaaaatcatgcactcaatgttctcaggaaaatggtgcgggaacgcactgaacagttg
aactgggaaaagcagcagttgaacctttcaccggatgctgaacttaccactgaggatagg
ttacaattaattcacaaggcaatcagtcaactcccgccccagcagaaaaaagtgtttatc
ctcagccgttaccagcgacttaaatatgttgagatcgccaaagaacttaatttatcacgg
gaaactgtaaaatcatacctgcagatcgctacaagttccatccggaaatatgtgaatacc
cacctcccgctttttatctttttgttcagcaggtttttctactga
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