Pseudobacter ginsenosidimutans: FSB84_16575
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Entry
FSB84_16575 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_16575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_16575
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_16575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
Adcy_cons_dom
Gem4_C
HTH_24
HTH_23
PhyR_sigma2
HTH_AsnC-type
CadC_C
Motif
Other DBs
NCBI-ProteinID:
QEC43231
LinkDB
All DBs
Position
complement(4152831..4153427)
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AA seq
198 aa
AA seq
DB search
MLPRLVIPSSYDQDEFLQRLYHGEKEAFSFVFREYYAALCSFAEKLTGARDHAEDIVEEV
FLKIWLKQQPFDDLAHLKNFLYKTTRNACIDHLRRREHSLERQAQFQQLQHNWESASDLD
MIRTEVYRSIYRAIETLPEQCGKIVRMGYIDGKSNEEIAEDLGLSIQTVKNQKTRGIQLL
RLRIPPESFALFLLIARF
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
attctgccccggttggttataccctcatcatatgatcaagacgaattcctgcaaaggctt
taccatggcgaaaaggaggcattctcttttgtattcagggagtattacgcagccttatgc
tcttttgccgaaaagctgacaggtgcccgggaccatgcagaggatatcgttgaagaagta
ttccttaaaatatggttgaagcaacaaccattcgacgatcttgcccacctgaaaaacttc
ctgtacaaaacaacccgcaatgcctgtatagatcatcttcgcaggagggagcacagcctt
gaacggcaggcacagttccagcaattgcaacataactgggaatcagcatccgatctggat
atgatccggacagaagtatacaggagtatttacagggccatcgaaacactgccggaacaa
tgcggaaagatcgtccgcatgggatatatcgacggaaaatcgaatgaagaaattgccgaa
gacctcggtctttccattcagactgtcaagaaccagaaaaccaggggcattcaattactg
agactccgcataccacctgaatccttcgccttattcctccttatcgcccgtttctga
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integrated database retrieval system