Pseudobacter ginsenosidimutans: FSB84_18790
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Entry
FSB84_18790 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_18790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_18790
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_18790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
HTH_Mga
PF0610-like_N
HTH_11
HTH_23
Sigma70_ECF
HTH_40
UPF0122
LepB_N
HTH_Tnp_ISL3
HTH_10
DUF6362
HTH_AsnC-type
HTH_36
HTH_Tnp_4
zf-U11-48K
Motif
Other DBs
NCBI-ProteinID:
QEC45992
LinkDB
All DBs
Position
4767215..4767796
Genome browser
AA seq
193 aa
AA seq
DB search
MDTYTLHTDEQLAVLLGEGNRGAFTEIYNRYKGILFVHAFRRLEDRAQAEDVLHDLFAAL
WAGRTELHIHSGNLGGYLYAAIRNRILKSYARDANAGLYISSIASAIDSGTATTDHRVRE
NQLRQHIEKEIALLPEKMREVFILSRTNHLSHKEIAGQLGLSEKTVKNHINHALKLLRKK
LGVLRFIYLLMFY
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacacgctacatactgacgaacagttggccgttcttcttggagaagggaac
cgtggcgcctttaccgagatttacaatcgctacaagggtattctcttcgtacatgccttc
agaaggttggaagaccgggcacaagcggaagatgtgctgcatgacctctttgctgccctc
tgggcagggaggaccgaactgcatatccattcgggaaaccttgggggatatctctatgca
gccatccgcaacaggatactgaagagctatgccagagatgcaaatgccggcctttatatt
tcttccatcgcaagtgccattgacagcgggactgcaactacagaccatcgggtgcgcgaa
aaccagcttcgccagcacatagaaaaagagatcgcactcctgccagaaaaaatgagggaa
gtgttcatcctcagcaggacaaaccaccttagccataaagagatcgccggacagcttggc
ctcagcgaaaagacggtgaagaaccatatcaatcatgccctgaagctcctgcgcaaaaaa
ctcggcgtactgcgctttatctacttgttgatgttctattaa
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