Pseudobacter ginsenosidimutans: FSB84_19870
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Entry
FSB84_19870 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_19870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_19870
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_19870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AKAP_110
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QEC43825
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Position
5052781..5054097
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AA seq
438 aa
AA seq
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MSFSIDKQSIEELNLMGKFRQGSVYFLFNKVQTRGGEQLLDELFRHPLTDEKIINHRTAV
FSFFQQQHLAFPFDSSQVSIMREYIDTATARSKAASYLNILLLKMTAALTRNERFKILIQ
GIQASISVLKRAYAFANELSVHESPFKERAVAIRQLLESPQLAALMDTDIYKSVSLQSIA
TFDYLLRNKMNQQLQLVLDFIFETDVNIAVAAVAKERGFNYAKALPKQDNLLRAVELRHP
CIENAIGNTINMHPGSNVIFLTGANMAGKSTWMKSIGISVYLAHIGFPVAAASMEFSVRE
GLYSSINVADNIGLGYSHFYAEVVRVKNAAEATSTGRHLLLMFDELFKGTNVKDAYDGTL
AVTEAFAQYRNCLFIVSTHIIEVGETLKQKKNIQFCFMPTIMKQGIPAYTYQLKEGITID
RQGMMIIRNEGILEMIGS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagcatagacaaacaatcgattgaagagttgaacctgatggggaaattcagg
cagggttccgtgtatttcctgttcaacaaagtgcaaaccaggggaggagaacaattgctt
gacgaattgttcaggcatccgctcacagacgaaaagatcatcaatcatcgtactgctgtg
tttagcttttttcagcagcagcatcttgcattccctttcgatagcagtcaggtgagtatt
atgcgggagtatatcgatacagccaccgctcgcagcaaagcggccagctacctgaatatc
ctgttgcttaagatgacggcagccttaacgaggaacgaacggttcaaaatactgatccag
ggtattcaggcttctatctctgtgttgaaaagagcctatgcttttgccaatgaattatct
gttcatgaatcgcccttcaaagagcgcgctgttgccatcaggcagctacttgaatcaccc
caactggcagcgctgatggatacggatatttataaatcggtttcgctgcagtctatcgca
acattcgactacctgcttcgaaataaaatgaaccaacagctgcaattggtgctggatttc
atttttgaaacagatgtaaatattgccgtggctgctgttgccaaagagcgtggcttcaac
tatgcgaaagcgctgcccaagcaagacaatctactgcgtgctgttgagctcaggcatccc
tgtattgaaaatgccatcggcaatacgatcaatatgcatcccggcagtaatgtgatcttt
ttaaccggcgccaatatggctggtaagtctacctggatgaaatcgatcggtatcagtgtc
tacctcgctcatattggatttccggtggctgcagccagcatggagttttctgtgcgcgaa
ggactgtattcgagtatcaatgtggctgataatatcggcctgggatacagccatttttat
gcggaagtggtaagagtaaagaatgcggcggaagccaccagtaccggcaggcacctgttg
ctgatgtttgatgaattattcaagggaaccaatgtgaaagatgcctatgatggaacgctt
gcagtaacggaggcttttgcgcagtacaggaattgtttgttcatagtgagcacacatatc
attgaagtaggagagactttaaaacagaaaaagaatattcagttctgttttatgccaact
ataatgaagcagggaatacctgcttacacctatcaactaaaagagggtatcaccatagac
cggcaggggatgatgatcatccggaatgaaggcattcttgaaatgatcggatcgtaa
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