Pseudobacter ginsenosidimutans: FSB84_19880
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Entry
FSB84_19880 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_19880
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
ABC_tran
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
QEC43827
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Position
complement(5056489..5057805)
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AA seq
438 aa
AA seq
DB search
MQFNTDKQTVDELNLLGKFRQGSVYHLFNEVRTRGGEQLLDQMFRNPMLDAESINQRSKI
FRFFQQSSLGFSFDVQQLNIMREYLDAGTGKSAFATVSSMLTQKLLSKLTRDERYKKSVQ
GLQATIVTLNRCHGMLEVLQQLKSPLADRVNQLLQLLSDKHLEKLRNTDIYKDLPVTILA
QYDHLLKSRLPEEMENLLQFIYELDLYISVSNVARKKGFTYAKALPAEMNVLQASKLAHP
CIDKAIGNDILMHENTNVIFLTGANMAGKSTLMKSIGIGIYLAHMGFPIAAKSFEFSVRE
GMYSSINVADNIGLGYSHFYAEVVRVKQAADAASSGKRLLLMFDELFKGTNVKDAYDGTL
AVTEAFAEYQECLFIVSTHIIEVGEALKETENIQFRFMPTIMDGARPKYTYILEEGITED
RQGMMIIRNEGILEMLKN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaatacagataaacaaacagtggatgagctgaacctgctgggaaaattcagg
cagggatcggtgtaccatcttttcaatgaagtaagaacccggggaggtgaacaattgctg
gaccagatgttccgcaatccaatgctggatgcggaaagcatcaaccagcgcagtaagatc
ttcaggttctttcagcaatcaagcctgggcttctcatttgatgtgcagcaactgaacatc
atgcgggaatacctggatgcaggcaccggaaagagtgctttcgccacagtcagcagtatg
ctcacccagaaactgctcagcaagcttacacgtgatgagcggtacaagaaatcggtacag
ggattacaggctaccatcgttacgttgaaccgctgccatggcatgctggaagtattgcag
caattaaaaagcccactggctgaccgtgtgaaccagctgcttcagttactttccgataag
cacctggagaaactgcgcaacaccgatatctacaaagacctgccggtaaccattctcgct
caatacgatcacctgctgaaaagccgcttgccggaggaaatggaaaaccttctgcaattc
atttacgaacttgacctgtacatttccgttagtaatgtagcccggaagaaaggattcact
tatgcaaaggctttgccggctgagatgaatgttttacaggcatccaaacttgcccatccc
tgcatcgataaagcaatcggtaatgatatcctgatgcatgagaacaccaatgtgatcttc
ctcaccggcgctaacatggcagggaaatccacgttgatgaaatccatcggtataggaatt
tacctcgctcatatgggatttccgattgctgcaaaatcatttgaattttctgtgcgcgaa
ggaatgtattcctccatcaacgtagctgacaatatcgggcttggttacagccatttctat
gcggaagtagtgcgcgtaaaacaagccgccgatgcggccagcagtggaaaaagattatta
ttgatgttcgatgaactattcaaaggcaccaatgtgaaagatgcctatgatggaacgctt
gcagtaacagaggcttttgcagaataccaggagtgtttgttcattgtctccacccatatc
atcgaagtaggcgaagcattgaaggaaacggagaatatccaattcaggttcatgcctacc
atcatggatggcgccaggccaaagtacacgtatattttggaagaaggcatcacggaagac
aggcagggcatgatgatcatcaggaatgaaggaatactggagatgctgaaaaactaa
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