Pseudobacter ginsenosidimutans: FSB84_20165
Help
Entry
FSB84_20165 CDS
T06126
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03030
DNA replication
pgo03430
Mismatch repair
pgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSB84_20165
03430 Mismatch repair
FSB84_20165
03440 Homologous recombination
FSB84_20165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgo03032
]
FSB84_20165
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_20165
Enzymes [BR:
pgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSB84_20165
DNA replication proteins [BR:
pgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSB84_20165
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSB84_20165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
DEDDh_C
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
QEC43879
LinkDB
All DBs
Position
5129597..5130970
Genome browser
AA seq
457 aa
AA seq
DB search
MYAIVDIETTGGHAAGNDITEIAIVLHDGEKIVQRFESLVKPDRTIPYYIQSLTGISTEM
VADAPRFEELAGTVHDLLKDRVFIAHNVNFDYSFVKHHLSAAGYDLDAQKLCTVRLSRKV
FPGLPSYSLGNLCREFGISNEQRHRAGGDADATVKLFEHLLQNNAEPHIAQFIRKKSAEQ
SLPPHLSKDVVDRLPYTPGVYYFHDIKGKVVYVGKAKNLKYRVRSHFTHNGAGRQRQDFL
RNIHDVSFEETGTELMAFILESVEIKRLWPEFNRSQKRFTPSFGLYRYEDRNGYIRLAID
KQKKHLQPLYTFNLLIEGHRLMRKMMEAFHLCPKLCFVQTDHSACVGVEGQPCNGACEQK
EPVDVYNARVEEAIGYLEQLLPSFAVVGEGKNRDEQSCILMEKGRFYGMGYLPGDAAVND
LETLKNFLTRYSENDYIRGLVYQYVDRYPKYKVVFPG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccattgttgatatagagactaccgggggacatgctgctggcaatgatattaca
gaaattgccattgtattgcatgatggcgaaaagatcgtgcaacgctttgaaagtctggtg
aaaccggatagaactattccttattatattcaatcgctcaccggcatctccaccgaaatg
gtggccgatgcaccccgtttcgaagaactggcgggcactgtgcatgatttgctgaaagac
cgcgtgtttattgcacataacgttaatttcgattattccttcgtcaaacatcatctctcc
gctgcgggctatgacctggatgcacaaaaactttgcaccgtaaggctcagccggaaagta
tttcccggactgccgagttacagcctgggcaatctctgccgggaattcggcatcagcaat
gaacaaagacacagggctggaggagatgccgatgccaccgtgaaactgttcgagcatttg
ctgcaaaacaatgctgagccgcatattgcgcaatttatccgtaaaaaatctgctgaacaa
tcgcttccgccccatctgtcaaaagatgtggttgaccggttaccttatacacctggcgtg
tattacttccacgacatcaaaggcaaagtggtgtatgtgggaaaggccaagaatctcaaa
taccgcgtacgcagtcattttacacataacggcgccggcaggcagcgccaggattttctc
cgcaatatccatgatgtcagttttgaagagacaggcaccgagctgatggccttcatcctg
gaaagcgtggagataaagaggttatggcccgaattcaatcgcagccagaaaagattcacg
ccttcgtttgggttgtaccgttatgaagacaggaacggatatatccgactggccatcgat
aaacaaaaaaaacacctgcagccactttatactttcaacctgttgatcgaagggcaccgg
ctcatgcggaagatgatggaagcctttcatctttgtccaaagctttgctttgttcaaacc
gatcacagcgcctgtgtaggcgtggaaggccagccctgcaatggcgcctgtgaacagaag
gaacccgtggatgtttataatgcaagggtggaagaagccattggctatctggaacaatta
ttgcccagctttgccgttgttggggagggaaagaacagggacgagcagagctgcatcctg
atggagaagggcaggttctatggaatgggctacctgccaggcgatgcagccgtgaacgac
ctggaaaccctgaagaatttcctcacccgctattccgagaatgactatatacgcggactg
gtgtatcaatacgttgatcgttacccgaaatataaagttgttttccccggataa
DBGET
integrated database retrieval system
