Pseudobacter ginsenosidimutans: FSB84_20840
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Entry
FSB84_20840 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_20840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_20840
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_20840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_23
AAA_29
AAA_28
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QEC44004
LinkDB
All DBs
Position
complement(5304574..5305890)
Genome browser
AA seq
438 aa
AA seq
DB search
MQFYTDKQTVEELNLLGKFRQGSVYHLFNEVKTRGGEQMLDQMFRNPLLDADSINQRSSI
FQFFQQSNLGFSFDVQQLNIMREYLDAGTGKRAFAILCSMFTQKLLSKLTRDERYKKSVQ
GLQATIVTLNRCHGILEVLQKLQSPLHNRINQLLQLLSDKQLEKLRTTDIYTDISVTTLA
QYDHLLKSRFHAEMEELLQFIYELDLYIAVSSVARKKGFTYAKALAPEQNILRAANLAHP
CIDKAIGNDILMSERHNVIFLTGANMAGKSTLMKSIGIGLYLAQMGFPVAAERMDFSVRE
GLYSSINVADNIGLGYSHFYAEVVRVKQAANAAASGKRLLLMFDELFKGTNVKDAYDGTL
AVTEGFADYNDCLFIVSTHIIEVGEALKQRGNIHSVFMPTIMEGSKPRYTYRLQEGVTED
RQGMMIIRNEGILEMLEG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttatacagataagcaaacggtggaagaactgaacctgttggggaaattcaga
cagggctcggtatatcacttgttcaatgaggtaaaaacgagaggcggagaacagatgctg
gatcagatgttccgcaaccctttgctcgatgctgacagtatcaatcaacgcagtagtatc
ttccagttctttcagcaatcgaacctgggtttttccttcgatgtgcagcaactcaatatc
atgcgggaatacctcgatgcaggaacgggaaagcgtgcatttgccattctctgcagtatg
ttcacacagaaattacttagcaagcttacccgcgatgaacggtacaagaaatctgtgcag
ggattgcaggccaccatcgttacgttgaaccgttgtcatgggatactggaagtattacaa
aaactacaaagcccgctgcacaatcgtatcaaccaactcctccaactgctttctgataaa
caactggagaagttacgtactacagatatctataccgatatttctgtaactacccttgct
caatatgaccacctgctgaaaagccgcttccatgctgaaatggaagaactgctgcagttc
atctatgagttggatctctatatcgcagtaagcagtgttgcgcgtaagaagggattcact
tatgcaaaggcactggctcctgaacaaaatatactgcgggctgcaaacctggcgcatccc
tgtatcgataaagctatcggcaatgatattctcatgagcgaaaggcacaatgttattttt
ctcaccggagcaaatatggccggtaagagtacattaatgaaatcgatcggcatcggcctc
tacctggcacagatgggattcccggtggccgcagaaagaatggatttttccgtaagggaa
ggcttatactcgtctatcaatgtggcggataatatcggacttggctacagccatttctat
gcagaagtggtacgcgtaaagcaggccgccaatgcagccgccagtggaaaacgcctgtta
ctgatgttcgatgaactgttcaaaggcaccaatgtaaaagatgcttatgatggaacattg
gcagtaacagaaggatttgcggattacaatgactgcctgttcattgtatccactcatatc
attgaagtgggcgaggcattgaagcaaagagggaatatccattccgtattcatgcccacc
atcatggaaggttcgaaacccaggtatacttaccggttacaggaaggcgttacagaagat
cgtcagggtatgatgatcatcaggaatgaaggaatactggaaatgctggaaggatga
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