Pseudobacter ginsenosidimutans: FSB84_23370
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Entry
FSB84_23370 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_23370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_23370
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_23370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
Sigma70_r2
HTH_40
HTH_23
HTH_38
NUMOD1
HTH_11
HTH_10
HTH_28
HTH_24
HTH_30
HTH_29
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QEC44472
LinkDB
All DBs
Position
complement(5933081..5933737)
Genome browser
AA seq
218 aa
AA seq
DB search
MFKGSFAFPIFEIPRPVLLPKHYRNSYRGLPLQVYQTYSEEQLLALLKDGDQLAFEQIYS
RYWKKLFTLAFHKLQSKHDAEDIVHDIFASIWLRRAELDIKSLEAYLAVAVKYKILEYIN
KSMQHVPVSEDSHENLATILPSDQLDARILASLLSQKIHQLPEKCRIVFEQSRLEGKSNP
EIARDLNISRKTVEKHISTALRQLRLNLKDFFSAFFSF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaggctcatttgctttccctatatttgaaataccaagacctgtcctactacct
aaacactatcgtaactcttatagaggactccccttgcaggtctatcaaacatatagcgaa
gagcaattattagcactcctgaaagatggcgaccagcttgcatttgagcagatctactca
cgttactggaaaaaactcttcacactggctttccataaattacaatcgaagcatgatgcg
gaagatatcgtccatgatatttttgccagcatctggttgcgcagggctgagctcgatatc
aaatcactcgaagcctacctggctgttgctgtaaagtataagatcctggaatacatcaac
aagtccatgcagcatgtgccggtttcggaggactcgcatgaaaacctcgccactatcctg
ccttccgatcaactggatgcgcggatacttgcttccctgctcagtcagaagatccatcaa
ctcccggaaaaatgccgcattgtatttgagcaaagccgcctggaggggaaatcgaaccct
gagattgcgcgggacctgaatatttcccgcaagaccgttgaaaagcatatcagtactgca
ttacggcagctccgtctcaacctgaaggacttcttctccgccttcttttctttctga
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integrated database retrieval system
