Pseudobacter ginsenosidimutans: FSB84_23410
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Entry
FSB84_23410 CDS
T06126
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_23410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_23410
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_23410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
GerE
Sigma70_r4
UPF0122
HTH_40
HTH_23
HTH_10
HTH_24
Terminase_5
HTH_11
DUF8040
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QEC44480
LinkDB
All DBs
Position
complement(5944746..5945300)
Genome browser
AA seq
184 aa
AA seq
DB search
MIQITEIKKGDQVAYQAVYDLYHAKLFHYFLKRTRIKEQAKDLTQQSFIKLWKSRHTLSD
AYSLDTQLFTIASSIFVDHLRKQAAERKYQHRLEDDLCEQPALVCHSNTDYESADYLDAV
SEDLPPIRRNVFMLKIAKGYSNKEIAEQLSVSIKTVEDHYSKALKHVRSLVTILLFLHIL
FSQY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgatccagataactgaaataaagaaaggcgatcaggttgcataccaggcggtatacgac
ctgtatcacgctaaattgtttcattatttcctgaagcgtacccgcataaaagagcaggcg
aaggatctaacccagcaatcgtttatcaaactctggaaatcaaggcatactctctctgat
gcatattccctcgatacacagctcttcaccattgccagctccatttttgtggatcacctg
cgcaaacaggctgctgaacgcaaataccagcatcgcctggaagatgatctctgcgagcaa
cctgcactggtctgtcactccaatacagactacgaatccgccgattacctcgatgccgtt
tcggaagaccttccacccatccgcaggaatgttttcatgctgaagatcgccaagggctat
tccaacaaggaaatagcagaacagctttctgtaagtatcaaaacggtggaggaccactat
tccaaggcattgaagcatgtacgctccctcgttaccatcctgctttttctgcatatcctt
ttttcccagtattaa
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integrated database retrieval system
