Pseudobacter ginsenosidimutans: FSB84_23950
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Entry
FSB84_23950 CDS
T06126
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgo02000
]
FSB84_23950
Transporters [BR:
pgo02000
]
Other transporters
Pores ion channels [TC:
1
]
FSB84_23950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEVED
Por_Secre_tail
RCC1
TcfC
Motif
Other DBs
NCBI-ProteinID:
QEC44580
LinkDB
All DBs
Position
6067944..6077063
Genome browser
AA seq
3039 aa
AA seq
DB search
MIKLALLKTIAWILVIISCALAPVSAQTLLTESFNYTGGTPLTSNNWTVRASGTPVINVS
AGNLNHSSSLTNDIGNKVQLTNTGQDVYRTFTSSNTTLYAGMVVNVSAAATGDFFFILGN
STSPETYGSKIYIRSDGSGGFNFGVVRGTGGTPVYESTSRSFGTNYFLVLKYEVVAGATN
DAIKLYVDPSPVATEPGAAAVQYNAATGAEISASYPLSSVGLYQGTAAAAATLQIDNIHV
STTWAGITTDQFDYGDAPNTFNNTKDGVFAPAVHKTLAGLRIGATQPDAEPAPASVASPN
NNNAPNGDGTDEDGIDVSTDILKKGLFFSINVPVSNPASTTSYLYGWIDFNNNGVFELSE
AADAVKTITTAGSSTQVLTWAAAKSAAIPDGIDKLYLRLRVSNRSLIDFTTAASGGALID
ERSIGNGAASTTNAADHAQVTSGEVEDFQIDVTRIYDFGDLPASFENDLSGAPRHAIHAE
GGLVLGSLIDLETEAASVTSPQENNGAGDNANGQDDEDALTSPPSVIKNVAYSITVPVKN
PTAAAASGYLYAWLDLNGDGKFTSDELASTGTGTTGSIAIGATTNRTLTWSTTQTNIINA
ASSNIYLRIRLSSIALSDFTTGTNNALVDERAIGNGATSTSNSANATTVSLGEVEDYQLS
VNEFDFGDLPAAYENGLAARQIAVSTRRIGTLIDYETSAASVAAGLDNNNNNGDGEDEDG
LNATDLPVIKKGAPFTFNIPVTVSATSQLIAWIDFNGNGQFELSEAAYTAATGATQGYRA
IAAGASTQSIYFRGSQTNLLTGSHAYLRIRLTSTAGTDNAATTGVDERSIGDGLSTAVYG
TPQEGEIEDYQLAVTTDLDYGDAPASYENNNAAAAVPARQYTTDDLFMGNAYGLESSPSP
VISPADNNGNNGDGEEEDGLSATQLYIRTGSNNIYTVTVNNTTGAAATLYAWIDLNNNGR
FETGEAATAVSVANGATTANITFTAAQVNTITVDKVYMRLRLLLPNTDGAIGDNAATTAI
DERSIADGLSTGLYTTVSLGEIEDYQLTIIKDFGDAPASYENGDPASQTNSSAPSVLTLG
NTIDFELAPASVTTPSDNNTTNGDGADEDAVTTPQTITKGAPFVLQVPVTIGQTLAAGTK
YLYGWIDLDGDGEFDVNEQTQATFTNTAAGSLLLTLTWTSAQTNSLTPAVISSGKTYVRL
RLSSVSIANAAVGTARDQRSYGKGNADGEIEDYQLLVTDLADFGDAPAGYENDQAALPVP
ARQASSANLKLGNNAPDVESSLANAVTAPASNNSPNGDGTDEDGILELIPVYDGIAYSAK
VSVFNNSGAARTLHGWIDFNNNGRFENTAGALEYASVSVPASASQQTVTLTWTAAQTAAI
PALTNNLYMRLRITDGASVADNTTSAIVDERAIGDGLSTGIYGTLALGEIEDYQLQVITD
HDYGDNPASYDNDRTTPTPLPVPARQAISQALYLGQHPADAEATAQHSANANGDNILGVN
DEDAATPGVITRGGGYVLNVSVTNNTGSAQTLHAWIDFNNNGRFENAGTALEYTSVSVPA
SANPQTVTLIWSAAQSNGIPDPATPAQLHMRLRITAGAVADFTAGTNNALVDERAVGDGL
STGVYAALASIGEVEDYVIPVSTNYDYGDAPASYENGLPARNISSALLQIGGTPDVEAAA
QSVAANADNNGTNGDGADEDGIDPSLHKVSPNTVFSLPVRVTNTSGTTRALMGWIDFNNN
GIFEDAEAATFANVVTATFDGTATLTWTAAQSRNVNTAHLYMRLRFINAAATNNAGTSMD
ERAYADGDATGVYLAGPRVGEIEDYRLEVNPTYDFGDVPLTYEANAAAATVAARHQPAST
LFIGAVYDTEATANTVAANANNNNPNGDGADEDGITMSLPTLIPGGSYSLAVNVFKSITG
TGTLHGWIDLNNDGRFSAGEYASVPVTAATGAQTATLSWSATPYSGVRPTTYMRIRFTTT
ALADNAATPAVDERSIGDGLNTGLYGTTPPNGEVEDYIIPVDESGTILPLADCGGLGSMD
PVQAGFHATIVRPASGGYLIFGENTHGDGLTNLTSPTLLVSGSNGFNFNGEVRMLTTGSS
SAYNLAQYFALTTAGLYAWGTQGRVVATSVTSSTAMQPISLPPGIAPAQVKMIDAGSSYT
TTGAAGSYSSHNGSLALLTTSGQVWIRSSVNSPNTTDAFNAVQGDGNLLPDNSSTGWHLV
QTSAGVPLTGMLDVRTTGTVAMATDGVKLYTWGRNMFTGDGTAATTLHYATEMTSPAALS
TPIKQIDIGYGNNIAASYFVLDQAGVVHVLGNNNAGQLGIGNTVTQLSWNRITQKNEEPE
IAGNQTDITTPIGVVTKISTNNHDAFHGRLMLITADKRAYHTGTSNGSTSGTVSPTSTMI
PTAMTSSNGTTLLQGKITHIEAGGHISVMAKEGSDRYGYVGHTASGSDGCNGCTGSPSEY
NFDQTPSTGPLCGIQAFDFGDLDNRYNLKDSAKHEITYAQQSNPLKLGALAADADDGPQI
SVDGAENNADGDNIDSRGNDEDAFVSLPAKVPGDYTIAVPLTNITGSTAYLYGFIDWNGD
GAFSSNETVVVPVPSSASQQVINITWTDPELTLSGTCVSDAEQLRSFVRLRLTTDVLFDH
TATTAVDERSHLLASDGEVEDYYLDWTPQSTQLDYGNLPHEGSPVNWSRASATLTSMDLS
TSRIWLGDNNNYPDQGCASNQARNGGLVVKKASTAVPGSGTAADPFLLDVDNPSGTFNFE
ITVNGNGSPANVYWGVWVDANGNGNFTDADDVFTSGVTLHGSPVTVTAPLTILNGGTNTG
ALNGAIRVAASAQDAGFSKLQNGAVNVVNGEIEDYYIAYLTALPVTLISFDAVKDGRNTQ
LTWKTAEELNTATFEIERLSGNSNQWITIGKVAAAGNSTVERQYRFTDDNVYPGANFYRL
KMIDLDGKLAYSRVRFVDFGNEAFPITMSPNPASDIVTIKGLTGSNRIQLLDVSGRLIQQ
FNSNDPIQKINISKLTKGVYMVRILKDGQVTVTLKLLKG
NT seq
9120 nt
NT seq
+upstream
nt +downstream
nt
atgattaagttggctttgctaaaaacaattgcctggatattggtaataatatcctgtgca
ctcgctccggtatccgcacaaacactcctcacagaaagtttcaactataccggcggcact
ccacttaccagtaacaactggacagtccgggcatcaggaacacccgttattaatgtttct
gcaggcaacttaaatcatagtagcagccttacaaatgatatcggcaataaagtacagcta
acaaataccggccaggatgtatatcgtacattcacatccagcaatacaacactgtatgcc
gggatggtggtgaatgtttcggcagcagctaccggcgacttcttctttatactaggtaac
agcacgtcgccggaaacctatggcagtaagatctatatcaggtctgatggcagcggcgga
ttcaactttggagttgttcgcggtactggcggaacaccggtatacgaatccacatcccgt
tcatttgggaccaactatttcctggtactgaaatacgaagtggtggcaggcgctaccaat
gacgccataaaactgtatgttgacccatcacctgttgcaactgaaccaggagcagcagct
gttcaatacaatgccgccacaggcgcagagatctctgcctcctaccctttatcatcggtt
gggttgtaccagggaacagcagccgctgccgctacgctccagatcgacaatatacatgta
tccaccacatgggcaggcattacaaccgaccaatttgattacggcgacgcccccaatacc
ttcaacaatactaaagacggtgtttttgcacctgccgtacacaaaacacttgccggtcta
aggataggcgcaacgcagcccgacgcagaaccggctccggcctctgtagcgtcccccaat
aataacaacgctcctaacggtgacggcacagacgaagatggtatcgatgttagcactgat
atacttaaaaaaggtttattttttagcataaacgtccccgttagcaacccggccagcaca
acatcgtatctctatggctggatcgacttcaacaataacggcgtattcgaattatcagaa
gccgcagatgcagttaaaaccattacaacggcaggcagcagtacacaagtgctcacatgg
gcagccgccaaatcagctgctatccccgatggcatcgataagctttatctcagattacgc
gtcagtaaccggtcgctgatcgacttcacaacagccgcatcaggcggtgcactgatagat
gagcgaagcatcggcaacggcgccgccagcacaaccaatgctgccgaccatgcacaggtg
acttccggcgaagtagaggacttccagatcgacgttacacgtatctacgattttggagat
ctcccggctagtttcgaaaacgatctttccggcgccccacggcatgccatacacgcagaa
ggaggcctggtgctgggtagcctgatagaccttgaaacagaagcggcttctgtaacaagc
ccacaggaaaataacggcgccggagataatgccaacggacaggacgacgaagacgcgtta
acttctccgcccagcgtaatcaagaacgtagcttacagcattactgttcctgtaaagaat
ccaactgctgcagctgcatcaggatacctgtatgcctggctggatctgaatggtgatgga
aaattcacttccgatgaactggcatccaccggaacaggaactaccggcagtattgccatt
ggcgcaaccaccaaccgcacactcacctggagcaccacacaaaccaatatcatcaacgcc
gcctcttcaaatatttacctgaggatcaggctctcttctatagcgctttccgactttact
acaggcaccaacaatgcgcttgttgacgaaagagccatcggaaatggcgctacctctact
tccaactcagccaatgccaccaccgtatcgctgggcgaagtggaagactaccagttaagt
gtaaacgaatttgatttcggagatcttcctgctgcgtatgaaaacggacttgcagcaaga
cagatcgccgtgtctacccgccgcatcggcacgctgatcgattatgaaacctcggccgct
tccgttgccgcaggattggacaacaataacaataacggagacggagaagatgaagacggt
ctgaatgcaaccgatttgcctgtaataaaaaaaggcgcaccctttacttttaacatacct
gttaccgttagcgccacttcgcagctgatagcctggatagatttcaatggcaacgggcag
tttgaactttcggaagcagcctatacagcagctaccggcgccacgcagggctatcgcgca
attgcggcaggcgccagtactcagagtatttatttcagaggatcacaaaccaacctgctc
accggaagccatgcttacctgcgcatccgtctcaccagcaccgctggcacagataacgcg
gcaacaaccggagtagatgagcgcagtatcggtgatggattatccaccgctgtatatggc
actccacaggaaggtgaaatagaagattaccagctggcagtaaccactgatctggattat
ggagatgcaccagccagctacgagaacaataacgcagcggcggctgtccctgcccgtcag
tataccacagatgacctgttcatgggaaatgcctatggcctggaaagcagtccttcgcct
gttatctcccccgcagacaataatggaaataatggagacggagaagaagaagatggactg
tccgctacacagctgtatataagaacaggaagcaataatatttacacggttacggtaaat
aatactaccggcgccgctgcaactttatatgcctggatagacctgaacaataatggaaga
tttgaaacaggagaagcggcaaccgctgtatcggtagccaatggcgccactacagccaac
atcacttttacggctgcccaggtgaataccataacggtagataaagtgtacatgcgcctg
aggcttttactgcctaataccgatggtgctatcggcgataatgcagccaccaccgccatt
gatgaacgctccattgcagacgggctctctaccggtttatataccacggtctccctggga
gaaattgaagattaccagctgaccatcatcaaagattttggcgatgctcccgcttcttat
gaaaatggcgatccggcctctcaaaccaacagtagcgctccttccgtacttaccctgggt
aatacgatcgattttgagctggcccctgcatctgttacaacaccttcagacaacaataca
actaacggcgatggcgctgacgaagacgctgttactacaccacaaaccattacaaagggc
gcgccatttgtattgcaggtgccggtaacaatcggacagacattagcagccggcacaaaa
tacctctatggctggatagaccttgacggtgatggcgaatttgatgtaaacgaacaaaca
caggctacattcaccaatactgctgcaggctctctcttactgacattgacatggacctca
gcacaaaccaattccttaacacctgcagtgatcagttcgggaaaaacctatgtaagacta
aggctttcgtctgtcagcatagccaatgccgctgtaggcacagccagagaccagagaagt
tatggcaaaggaaatgcagatggcgaaattgaagactaccagttactggtaaccgatctg
gcagattttggcgatgctcccgctggttacgaaaacgaccaggctgctttaccggttcct
gcaagacaggcgtcttccgctaaccttaaactgggaaataatgcaccggatgtggagagc
tctttagcgaatgctgtaacggctcccgcctccaacaatagtcccaacggagatggtaca
gatgaagatggcatattggaactgatacctgtttacgatggcattgcctacagtgcgaaa
gtaagtgtgttcaataattcaggcgctgcccgtactctgcatggctggatcgatttcaat
aacaacggtcgttttgagaacactgccggcgccctggaatatgccagcgtgagcgtgcct
gcgtccgcatcacaacaaacggtaacattgacctggacagccgcgcaaaccgccgccatc
cccgcactgaccaacaacctgtatatgcgcttacgcattaccgatggcgcttccgtggcc
gacaatacaacatccgcaatagtggatgaacgggccattggtgatggattgtccaccgga
atatacggcacattggcactcggcgaaatagaagactaccagctgcaggtgatcactgat
cacgactacggcgataacccggcaagctatgacaatgaccgcaccactcccactccattg
ccggtaccggcacgccaggccatcagccaggcattgtacctcggccagcatcccgcagat
gctgaagccacagcacagcattcagccaatgccaatggagataatatactcggtgtaaac
gatgaagacgcggccactccgggcgtcattacacgcggtggtggttatgtactgaacgtt
tcagtcaccaacaacacaggatcagctcaaaccttacacgcctggatagatttcaataat
aacggtcgttttgaaaatgcaggaactgcgcttgaatataccagcgtatccgtacctgca
tctgccaatccacaaacggtaacgctcatctggagcgcagcacaaagcaatggcattccc
gatcccgcaacaccggcacagcttcatatgcgattgcgcattactgcaggcgccgttgcc
gactttactgcaggcactaataatgccctggtagacgaacgcgccgtcggcgatggattg
agcaccggagtatatgcagcattggcatccattggcgaagtggaagattatgtaattcct
gttagcaccaattacgattatggtgatgccccggccagttatgaaaatggtttgccggca
agaaatatttcctcagccctgttacagataggcggcacccccgatgtggaagccgccgca
caaagtgtagcagccaatgccgacaacaacggaactaacggagatggcgcagacgaagac
ggcatcgatccatcgctccataaagtgagccccaacacagttttttctctccctgtaagg
gtaaccaatacctctggaaccacacgtgccctgatgggatggatcgactttaacaacaac
ggaatatttgaagatgcggaagcagccaccttcgcaaacgttgtaacagctacttttgat
ggtactgcaacactcacctggactgctgcgcaaagccgcaatgtgaatacagctcacctg
tacatgcgtttacgattcatcaatgcagcggcaaccaacaatgccggcacatcaatggat
gaacgcgcatatgcagacggcgatgcaacaggggtatatcttgcagggcccagggtggga
gaaattgaagattaccggcttgaagtaaacccaacgtatgactttggtgacgttcctcta
acctatgaggccaatgctgctgctgcaacggttgcagcacgccaccaaccagcatccaca
ttgttcattggtgcagtgtatgacacggaagcaacagcaaatactgtagctgccaatgcc
aacaacaataatccaaatggcgacggcgcggatgaagatggcataaccatgagtttaccc
accctgatacctggcggctcctatagcctggcagtaaatgtattcaaaagcattaccggc
accggcacactgcatggctggatagaccttaacaatgatggaaggttctctgccggcgaa
tatgcatcagtgcccgtaactgctgctaccggcgcacaaacagctaccctctcctggtcg
gctactccttacagcggagtgagacccacaacctatatgcgcattcgatttaccactact
gccctggcagacaatgcagctacacccgcagtagatgaacgctctatcggagatggattg
aatacaggcttatatggtacaacgccaccgaatggagaagtggaagattatattattcct
gtagatgaatccggcactattcttccactggcagattgcggaggacttggtagtatggat
ccggtgcaggcaggttttcatgctactattgtaagaccagccagtggcggttacctgatc
tttggcgaaaacacccacggtgatggtttaaccaatttgacttctcccaccctgctggta
tccggcagtaatggattcaactttaatggagaagtaagaatgctgacaaccggttcttcc
agcgcctataacctggctcaatattttgcattgaccacagcaggcctttatgcatggggc
acccagggaagagtagtagccaccagtgttaccagcagtaccgctatgcaacccatcagc
ctccctccgggcattgcaccagcacaggtaaaaatgatagatgcaggcagctcttataca
accactggtgcagccggaagttattcaagccataatggttcgctggctttattgactacc
agtggccaggtttggataagaagcagtgtaaacagccccaacaccacagacgcattcaat
gcagttcagggagatggcaacctcctgcctgataactccagcacaggctggcacctggta
caaaccagcgccggcgtaccgctgaccggcatgttggatgttcgtacaaccggcaccgtg
gccatggctactgatggcgtgaagttgtatacatggggacggaatatgttcaccggagac
ggaactgcagccactaccctgcattacgcaacagaaatgacaagtcctgcagcactttcc
acccctattaaacagatcgatatcggctacggcaataatatagcagcatcctattttgta
cttgaccaggcaggtgtggtgcatgtattgggcaataacaatgcaggacaattgggcatt
ggaaatacagtaacacagttgagctggaacaggattacacaaaagaatgaagagccggaa
atagccggcaaccaaacggatattactacacctataggtgttgtaaccaaaatatcaacc
aataaccacgatgcgtttcacggtcgtctcatgctgatcaccgctgataaaagagcttat
cataccggaaccagtaacggcagcacatcaggcaccgtttcgccaacaagtacgatgatc
cctactgctatgaccagctccaatgggaccactctattacagggaaagatcacccatatt
gaagcaggaggacatatcagcgttatggcgaaagaaggcagcgatcgttatggatatgtt
ggccacaccgccagcggctccgatggctgtaatggttgtaccggaagcccctcggaatac
aacttcgatcaaacgccgtctacaggccctctgtgtggtatccaggccttcgacttcggt
gacctggataacaggtacaacctgaaagacagtgcaaaacatgagatcacttatgcacag
caatccaacccgttaaaattaggcgctcttgccgctgacgctgatgatggaccgcagatc
tctgtcgatggtgcagagaacaatgcagatggagacaatatagacagtagaggtaatgat
gaggatgcgtttgtttcattaccagcaaaagtccccggagattatacaatagcagtaccg
ctcaccaatatcactggcagcacggcttatttatatggattcatagactggaatggtgat
ggcgctttcagtagcaatgaaacggtggttgttcctgtgcccagttcagcatcgcaacaa
gtgatcaatatcacctggaccgatccggaactaacgttatcgggtacctgcgtaagcgat
gccgaacagctcagaagctttgtacgcctgcgcctgacaactgatgtgctattcgaccac
actgctaccaccgcagtagatgaacgcagccacctgctggccagcgatggagaagtggaa
gattattatctcgactggactccgcaatcaacgcaattggattatggcaatctaccgcat
gaaggcagcccggtaaactggagcagggcctctgccacactgacttcaatggatctcagc
accagcaggatctggctgggagataacaacaactatcccgatcagggatgtgcttccaac
caggcacgcaatggcggattggtggtaaaaaaagcaagcactgcagttccgggcagcggt
acagcagctgatccattcctgttggatgtagacaatccttccggcaccttcaattttgag
atcactgtaaatggcaatggttcgcccgccaatgtatactggggagtttgggtggatgca
aatggtaatggcaactttacagatgcagatgatgtgtttacttcgggcgtaacactgcac
ggaagcccggtaacagtcactgcaccactaaccatactcaacggaggaaccaataccggc
gctcttaatggcgcgatccgtgtggcagcatcagcccaggatgcaggtttcagtaaactg
caaaatggcgcagtaaatgtggtgaatggagaaatagaggactactatattgcatacctg
acagcactgccggtaaccctgatcagttttgacgccgtcaaggatggtcgcaatacacaa
ttgacctggaaaaccgccgaagaattgaacacggcaactttcgaaatagaacgtttgtct
ggcaattccaatcaatggattacgatcggtaaagtagcagcggcaggcaacagcacagtt
gaacggcaatatcgattcactgacgacaatgtatatccgggtgctaatttttaccgcttg
aaaatgatcgatctggatgggaaactggcatatagcagggtgcgcttcgtagattttgga
aatgaggcattccccatcaccatgtcgcccaaccccgccagcgatatagttaccatcaag
ggacttaccggttccaacaggatccagctgcttgatgtaagtggcaggctgatccagcag
ttcaacagcaatgatcccatacaaaagatcaacataagcaaactcacgaaaggcgtttac
atggtaaggatattaaaagatggacaggttacggttaccttaaagttgttaaagggatag
DBGET
integrated database retrieval system
