Pseudobacter ginsenosidimutans: FSB84_25365
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Entry
FSB84_25365 CDS
T06126
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSB84_25365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_25365
Enzymes [BR:
pgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FSB84_25365
DNA repair and recombination proteins [BR:
pgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FSB84_25365
Prokaryotic type
FSB84_25365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEC44842
LinkDB
All DBs
Position
6476077..6476751
Genome browser
AA seq
224 aa
AA seq
DB search
MDVKIDESWKVALKNEFTKTYFLEIATFLRTEKMTGKTIYPPGGQIFNAFNLTHFDNVKV
VILGQDPYHGAGQAHGLCFSVAPGIKPPPSLVNIFKEMHSDLGLPIPNHGTLTKWAEQGV
LLLNASLTVRAGEPMSHAKIGWAQFTNSVIKKISDEKKNVVFLLWGKFAQEKQELIDVTR
HHLILKAAHPSPFSADSGFFGCKHFSKTNQFLVQNGIDPIDWAL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaaatcgatgaaagctggaaggttgcactgaagaacgagttcaccaagacc
tatttcctggagatcgctacttttctgcgaacggaaaagatgacgggtaagaccatctat
cctccgggcggccagatcttcaatgctttcaatctgactcatttcgataatgtgaaagtg
gtgatcctggggcaggacccttatcacggtgcaggacaagcgcacggactttgcttttcc
gttgcgccgggtatcaagcctcctccttccctcgtgaatattttcaaggaaatgcattca
gacctgggtctgcccattcccaatcatggcacgctcaccaaatgggcggagcagggcgta
ttgctgctcaatgccagtctcacagtacgtgcaggcgaaccgatgagtcatgccaagatc
ggctgggcgcagttcaccaattccgtgatcaagaaaatatcggatgaaaaaaagaatgtc
gtcttccttctctggggtaagtttgcgcaggagaagcaggaattgattgatgtaacgcgt
catcatctgatattgaaagctgcgcatccgtcgccgttttcagcagattccggttttttc
ggttgtaagcatttttccaaaaccaaccagttcctggtgcaaaacggtatcgacccaatc
gattgggcgctttga
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